| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0362 |
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| Symbol | rplF |
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| ID | 3735245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 370650 |
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| End bp | 371195 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637774949 |
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| Product | 50S ribosomal protein L6 |
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| Protein accession | YP_380693 |
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| Protein GI | 78211914 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.08503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCACGAA TCGGCAAAAA CCCTGTCCCC GTCCCTGAAA AGGTCACGGT TTCCCTCGAC
GGTCTCACCG TCAAGGTGAA AGGACCCAAA GGCGAACTGG AGCGCACCCT TCCTGAAGGC
GTCAGCGTCA GCGTCAGCCA GGACAACAAC ACCATCGTGG TCTCCCCCAC GAGCACCAAG
CGCATCTCCC GTGAGCGCCA CGGCCTGAGC CGTACCCTTG TCGCCAACAT GATTGAGGGT
GTCAGCAACG GCTACAGCAA GGCCCTGGAG ATCGTTGGTG TGGGCTCCCG TGCCCAGGTC
AAAGGCAAAA CTCTCGTGGT GAGTGCTGGC TACAGCCACC CCGTCGAGAT GGAAGCCCCC
GAGGGCATCA CCTTCAAGGT GGAGAACAAC ACCAGGGTGA TCGTCTCCGG TATCGACAAG
GAGCTGGTGG GCAACGAAGC CGCCAAGGTC CGCGCCATCC GTCCCCCCGA GCCCTACAAA
GGCAAGGGCA TCAAGTACGA GGGCGAGCGC ATCCTGCGCA AGGCAGGCAA GTCCGGCAAG
AAATAA
|
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| Protein sequence | MSRIGKNPVP VPEKVTVSLD GLTVKVKGPK GELERTLPEG VSVSVSQDNN TIVVSPTSTK
RISRERHGLS RTLVANMIEG VSNGYSKALE IVGVGSRAQV KGKTLVVSAG YSHPVEMEAP
EGITFKVENN TRVIVSGIDK ELVGNEAAKV RAIRPPEPYK GKGIKYEGER ILRKAGKSGK
K
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