Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0320 |
Symbol | tuf |
ID | 3737399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 324172 |
End bp | 325371 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637774904 |
Product | elongation factor Tu |
Protein accession | YP_380651 |
Protein GI | 78211872 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.716365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACGCG AGAAGTTCGA AAGGAACAAG CCCCACGTCA ACATCGGCAC CATCGGCCAC GTTGACCACG GCAAGACCAC CCTCACCGCT GCGATCACCA ACGTGCTCGC CAAGAAGGGT CAGGCTGAAG TGCAGAACTA CGCCGACATC GACGGCGCCC CTGAAGAGCG TGAGCGCGGC ATCACCATCA ACACCGCTCA CGTTGAGTAC GAGACCGAGA CCCGTCACTA CGCCCACGTG GACTGCCCTG GCCACGCGGA CTATGTGAAG AACATGATCA CCGGTGCCGC TCAGATGGAC GGCGCCATCC TGGTGTGTGC CGCCACCGAC GGCCCGATGG CCCAGACCAA GGAGCACATC CTGCTGGCCA AGCAGGTGGG CGTTCCCGCT CTGGTGGTTG CACTGAACAA GTGCGACATG GTCGATGACG AAGAGATCAT CGAACTGGTG GAGATGGAGA TACGCGAACT GCTCTCCAGC TACGACTTCC CCGGCGACGA CATCCCCGTG GTTCAGGTCT CCGGCCTGAA GGCCATCGAG GGCGAGGCTG AGTGGGAAGC CAAGATCGAG GAACTGATGG CGGCTGTTGA CTCCAGCATT CCTGAGCCTG AGCGGGAAGT TGACAAGCCC TTCCTGATGG CTGTGGAAGA CGTCTTCTCC ATCACCGGTC GCGGCACCGT GGCCACAGGC CGTATCGAGC GCGGAATAGT CAAGGTCGGC GAAGAAATCG AAATTGTCGG TATCAAGGAC ACCCGCAAGA CCACCGTCAC CGGTGTGGAA ATGTTCCGCA AGCTGCTCGA TGAGGGCATG GCTGGCGACA ACGTTGGTCT GCTGCTTCGC GGCATCCAGA AGGAAGACAT CGAGCGCGGC ATGGTGCTCG TGAAGCCCGG TTCCATCACC CCTCACACCA AGTTTGAGGG TCAGGTGTAC GTGCTCAAGA AGGAAGAAGG CGGCCGCCAC ACTCCTTTCT TCGCTGGCTA CCGCCCGCAG TTCTACATCC GTACAACGGA CGTGACAGGC CAAATCACTG CCTTCACCGC GGAAGACGGT TCCAACGTGG AAATGGTGAT GCCTGGTGAC AACATCCAGA TGACCGGTGA GCTGATCTGC CCCGTCGCCA TCGAGCAGGG CATGCGCTTC GCCATCCGCG AAGGCGGCCG CACCATCGGT GCTGGCGTGG TCTCCAAGAT CATTGAGTGA
|
Protein sequence | MAREKFERNK PHVNIGTIGH VDHGKTTLTA AITNVLAKKG QAEVQNYADI DGAPEERERG ITINTAHVEY ETETRHYAHV DCPGHADYVK NMITGAAQMD GAILVCAATD GPMAQTKEHI LLAKQVGVPA LVVALNKCDM VDDEEIIELV EMEIRELLSS YDFPGDDIPV VQVSGLKAIE GEAEWEAKIE ELMAAVDSSI PEPEREVDKP FLMAVEDVFS ITGRGTVATG RIERGIVKVG EEIEIVGIKD TRKTTVTGVE MFRKLLDEGM AGDNVGLLLR GIQKEDIERG MVLVKPGSIT PHTKFEGQVY VLKKEEGGRH TPFFAGYRPQ FYIRTTDVTG QITAFTAEDG SNVEMVMPGD NIQMTGELIC PVAIEQGMRF AIREGGRTIG AGVVSKIIE
|
| |