| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0316 |
|---|
| Symbol | |
|---|
| ID | 3737550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 321227 |
|---|
| End bp | 322102 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637774900 |
|---|
| Product | prephenate dehydratase |
|---|
| Protein accession | YP_380647 |
|---|
| Protein GI | 78211868 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0077] Prephenate dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.51764 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTTAT CGAGTCCATG CAGTGCGGCT TCGATGCCTA CACGTCTCGC ATTCCTTGGC
CCAGCCGGGA CATATGGCGA GCAGGCCGCC CGGGTGCTGA TCGAACAGGA CGCTCTCGAG
GATGTTCAGC TGGTGCCCTG CGTTGGGCTT CGATCGGTTG TGGAACAGCT GGCGGGGGGG
GAGTGTGATG CAGCCGTTGT CCCGATTGAG AACTCGGTTG AGGGGGGGGT GACAGCGACC
CTCGATGCTC TGTGGTCCCA CCCCGAGCTT TGTATTCGCA GGGCTTTGGT GCTGCCGATT
CAGCACGCTC TGCTTGGCAG TGGGCCACTT AGCAGAGTCA CGGAAGTGCT CTCTCACCCG
CAGGCCCTGG CGCAGTGCAG TGGATGGTTG GCCCAGCATC TGCCCGATGC CTTGCAACTG
CCCACCTCAT CCACGGCTGA AGCAGCTCGC ATGGTGGCGG GCAGTCCCTT TCGTGCTGCG
ATCGCTTCCC AGTCCGCCGC CCGGGAACAC GGGTTGGATG AGCTGGCGTT TCCTGTGAAC
GATGTTGCGG GCAATCGCAC CCGTTTTCTG CTGTTGTGTC GTGGGCAGCG CAGTGAACAT
GGCGATGTGG CCAGCTTGGC GTTCTCGCTG CATCGCAATG CGCCGGGGGC CTTGCTGGAG
GCACTGGCCT GTTTGGCTGA GCGGGGCCTG AACATGAGTC GGATTGAATC GCGACCGTCC
AAACGGGAGC TGGGGGAATA CGTCTTTTTT GTGGATGTGG ATCTTCCTCC GGATCCGTCA
ACGGCCCTGC AGGATCTGAT TGCCCAGTTG CAGCCTCTGT GTGAGCATCT GGCCCATTTC
GGTGCCTACC CCAGCAGCGA TTTGAGTGGC TCTTGA
|
|---|
| Protein sequence | MILSSPCSAA SMPTRLAFLG PAGTYGEQAA RVLIEQDALE DVQLVPCVGL RSVVEQLAGG
ECDAAVVPIE NSVEGGVTAT LDALWSHPEL CIRRALVLPI QHALLGSGPL SRVTEVLSHP
QALAQCSGWL AQHLPDALQL PTSSTAEAAR MVAGSPFRAA IASQSAAREH GLDELAFPVN
DVAGNRTRFL LLCRGQRSEH GDVASLAFSL HRNAPGALLE ALACLAERGL NMSRIESRPS
KRELGEYVFF VDVDLPPDPS TALQDLIAQL QPLCEHLAHF GAYPSSDLSG S
|
|---|
| |