Gene Syncc9605_0293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0293 
Symbol 
ID3735978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp297572 
End bp299086 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content60% 
IMG OID637774876 
Productputative type 2 NADH dehydrogenase 
Protein accessionYP_380624 
Protein GI78211845 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.236427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGGCA ACCATTACTT TCTGGAACTT GAACCGCCAG CTGAGCGGCT GCGTGATGCC 
CCGCATGTGG TCATCGTTGG CGGCGGCTTT GCAGGGGTGC ATGCCTGCAA AGCCCTGGCC
AAGGCCGATG TGCGCATCAC CCTGATTGAC AAGCGCAACT TCAACCTGTT TCAGCCGTTG
CTGTATCAGG TTGCTACCGG ATTGGTCTCA AGGAGCGATG TCGCCACCCC TCTGAGAGAA
CTGGTGGGGA CGCAAGGCAA CGTGCAGGTG CTCCTGGGCG AGGTCACCGC GGTGAACCCC
GAGGGCAAGC AGATCGTGTT CAACGGCAAG GCCTACAGCT ATGACCATCT GATCCTGGCG
ACGGGTTCGG GCAGCACCTA CTTCGGCCAT GAGGACTGGC GCACCTTTGC GCCCCCGATG
AAAATCCTCG AGCACGCCGA AGAGATTCGA CGCCGTCTGC TGATGGCGAT GGAGCAGGCA
GAGCAGACGC CGAATCCCGA GGCTCGCCAA TTTCTGCAGA CCGTTGTGAT TGTGGGCGGA
GGCCCCACCG GTTGTGAGAT GGCTGGCGCC GTTTCAGAGC TCATGCGGTG GGCTCTGAAC
AGTGCCTTCA AACAGCTTGA TTCTCAGAAA ACGAGAATCG TGTTGGTGGA CCCCGGCGAC
AGGGTTCTGA GAGCGATGCC AGAAGAGCTC TCCAAAGATG CTCAGAAAAC CCTTGAGCTG
AATGGCGTGG AATTCATACC CCAAGGCCGC GTCCAAACCA TGCGACCCGG AGAGGTTGTG
ATCAGCAGCC CAGATGGGGA TGTTCGTATC CAGGCGGCAA CGGTGATCTG GACCGCTGGA
GTCAAACCAT CCCATCTGGG ACAGAAGCTG ACAGAGGCCA CGGGCTGCGA ACTCGATCGC
GGTGGGAGGG TGATCGTCAA TCCCGATTTC TCGATTCCGA ACCATCCCGA GATCCGCATT
GCCGGTGATC TCTGCAGCTA CAGCCACACC GTGAATGGCA AGCCACTGCC TGGGATGGCC
GCTCCCGCCA AACAGGCCGG CACATTCATC GGCAAGGACA TCGCCGCGAT CGTGGCTGGT
CAAGACCGCC CCACGTTCCG CTATTTCGAT TTCGGCAGCA TGGCCGTAGT GCAGGCGAGT
GCCGTCGCCG ACCTGCATGG CTTCAAAGTT TCCGGCCGAA TGGGTCTGCT GCTTTGGGCC
ATCGTCCACC TGGCTTTGAT GCCGAACCGG GAGAACCGGA TCACGTTGAG CATCAAGTGG
TTGTACGTGC TTGCTACCCG TGAGCGGGCC TCAATTCTGC TCACAGGCAT GCCGAGCCAG
CATCTGGCCC TTGATGCGGA GGATGCCCAC TTCCCGATGG CCAGCGGCAA AGGTCCCTCC
ATCGCCGAAC CCGATGCCGC CCTCAAGGCA GCCATGGATT ACTACGCCCA TCAGCTCAGT
GGCCTTCCCC AAACTCAGGA GCTGCTCGAC ACCAAGGATG CTTCAGCTGC GGATTCGGAA
GCTGCCATCA AATAG
 
Protein sequence
MAGNHYFLEL EPPAERLRDA PHVVIVGGGF AGVHACKALA KADVRITLID KRNFNLFQPL 
LYQVATGLVS RSDVATPLRE LVGTQGNVQV LLGEVTAVNP EGKQIVFNGK AYSYDHLILA
TGSGSTYFGH EDWRTFAPPM KILEHAEEIR RRLLMAMEQA EQTPNPEARQ FLQTVVIVGG
GPTGCEMAGA VSELMRWALN SAFKQLDSQK TRIVLVDPGD RVLRAMPEEL SKDAQKTLEL
NGVEFIPQGR VQTMRPGEVV ISSPDGDVRI QAATVIWTAG VKPSHLGQKL TEATGCELDR
GGRVIVNPDF SIPNHPEIRI AGDLCSYSHT VNGKPLPGMA APAKQAGTFI GKDIAAIVAG
QDRPTFRYFD FGSMAVVQAS AVADLHGFKV SGRMGLLLWA IVHLALMPNR ENRITLSIKW
LYVLATRERA SILLTGMPSQ HLALDAEDAH FPMASGKGPS IAEPDAALKA AMDYYAHQLS
GLPQTQELLD TKDASAADSE AAIK