| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0213 |
|---|
| Symbol | |
|---|
| ID | 3735721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 220618 |
|---|
| End bp | 222051 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637774793 |
|---|
| Product | deoxyribodipyrimidine photo-lyase type I |
|---|
| Protein accession | YP_380544 |
|---|
| Protein GI | 78211765 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.615271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACGT CTCGCGTTCT GTTCTGGCAC CGGCGCGACC TGCGTCTGGC GGACAACCTC
GGTCTGGTGG TTGCGGCGCA GATCAGCCCG GCGGTGACCG GGGTGTACGT GCTCGATCCT
GCGGTGATCA ACCCGCCGCC GGAGCTGCCA CCAATGGCGC CGGCCCGGCT CTGGTTCCTG
ATCGAAAGCC TGGTGGAACT GCAACAGCGC TGGCGGGAGG CCGGAAGCCG CTTGCTCGTT
GTTGAAGGCG ACCCGGTGGC GGTGTTGCCT CAAGTGGCCC AGCAGATCAG TGCTGAGGCT
GTGGTGTGGA ACCGCGATGT GGAGCCCTAC GCCCGTAAGC GGGATCGCCA GGTGGCCAAA
ACGTTGCAGG CTGATGGCCG GCGGGTGGTA GCGGATTGGG ATCAGCTGCT GATCGCTCCG
GAGCTGCTCA AGACCGGCGC TGGTGATCCT TATCGCGTGT ATGGCCCGTT TCTGCGCAAC
TGGCGTGGTC AGGTGCTGGC TCAGAAGCCA GCCACCGTTG CAGCTCCGAC AGGCTTGGTG
GATCTTCCGC CTGAGCTGAT GCCGGCTGGG GATCCCCTGC CAGCCCTGCG CGAGAGCCAT
GGGTTCCAGG GCTCCGAGAT ATGCCCTTGC CGCCCTGGAG AGGCGGCGGC CCTGGAGCAA
CTCACCACCT TCTGTAATGG ACCGCTGCTC GGTTACGAAC CCGACCGCAA TTTTCCCGGC
ACCGCCGGCA CCTCGTATCT AAGCGCGGCC CTGAGCGTGG GCACCCTCAG CCCGCGTCAG
GCCTGGTGTG CCGCCCAGGA TTCCCGAGAG CAAGCCCGCA GTGAGGAGCA GTTGCAGGCG
ATCGCTGTTT GGGAACAAGA GCTGGGCTGG CGCGAGTTCT ACCAGCAGGC CCTGTTCTAT
TTCCCGGAGC TCGCCGATGG CCCCTATCGC GAGCAGTGGC GCCGCTTCCC CTGGGAGAAC
AACGAGGACT GGTTCGACTT CTGGAAGGAA GGGCAGACCG GCATGCCGAT CATTGATGCC
GCCATGCGTC AGCTCAACCA GACCGGTTGG ATGCACAACC GCTGCCGCAT GATCGTGGCC
TCCTATCTGG TCAAAGACCT GATCTGCGAC TGGCGCTGGG GTGAGCGCGC CTTCATGGAA
CTGGAGGTGG ACGGCGACCT GGCGGCCAAT AACGGCGGCT GGCAATGGAG CGCCAGCAGC
GGCATGGATA CCAAGCCCCT GCGCATCTTC AATCCCGCGA CTCAGGCCTC CAAATTTGAT
TCAGCCGGCG ATTACATCCG CCGTTGGGTG CCTGAGCTCC GCCATGTGAA CACTAAAGAT
CTTCTCAGTG GTGAGATCGG TGCGCTTGAG CGGCGCGACT ATCCCGAACC GCTGGTGGAT
CACAAGAACC AGCAGGCTCG TTTTAAAGCG CTTTACGCCA CCATCCGGTC CTGA
|
|---|
| Protein sequence | MPTSRVLFWH RRDLRLADNL GLVVAAQISP AVTGVYVLDP AVINPPPELP PMAPARLWFL
IESLVELQQR WREAGSRLLV VEGDPVAVLP QVAQQISAEA VVWNRDVEPY ARKRDRQVAK
TLQADGRRVV ADWDQLLIAP ELLKTGAGDP YRVYGPFLRN WRGQVLAQKP ATVAAPTGLV
DLPPELMPAG DPLPALRESH GFQGSEICPC RPGEAAALEQ LTTFCNGPLL GYEPDRNFPG
TAGTSYLSAA LSVGTLSPRQ AWCAAQDSRE QARSEEQLQA IAVWEQELGW REFYQQALFY
FPELADGPYR EQWRRFPWEN NEDWFDFWKE GQTGMPIIDA AMRQLNQTGW MHNRCRMIVA
SYLVKDLICD WRWGERAFME LEVDGDLAAN NGGWQWSASS GMDTKPLRIF NPATQASKFD
SAGDYIRRWV PELRHVNTKD LLSGEIGALE RRDYPEPLVD HKNQQARFKA LYATIRS
|
|---|
| |