Gene Syncc9605_0205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0205 
Symbol 
ID3736152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp212182 
End bp212748 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content56% 
IMG OID637774785 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_380536 
Protein GI78211757 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00876666 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.281377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA CCCCTTCCAA ACAGACTGCC GCCTCGGATG AAACGGGTGC TGTTGTTGCT 
CCCGAGCCTG GTCCGGTGAG CCAATGGCTG AACAAGCAAG GCTTTGATCA CAACATCCTC
GAGCCTGATC ATCTTGGCGT TGAGCAGATC GGTGTTGACG CTGCCGTTCT TCCGATGATC
GCTGCTGCAC TCAAGAGCAA CGGTTTCGAC TATCTGCAGT GCCAAGGGGG CTACGACGAA
GGCCCCGGTG AGCAGCTGGT TTGCTTCTAT CACCTGTTGG CGATGGCTGA ACAGGTCGAG
GCGATGGTGG CCGATCCCTC AGCCAAGCTG CGGGAAGTGA GGATCAAAGT CTTCCTCAAT
CGAGAAGGCA CCCCCTCATT GCCGTCGATC TATGGGTTGT TCCGCGGCGC CGATTGGCAG
GAGCGTGAAA CCTTCGACAT GTATGGCATC CAATTCGAGG GACATCCCCA TCCCAAACGG
TTGCTAATGC CTGAGGACTG GAAGGGATGG CCTCTGCGAA AAGATTACGT CCAGCCCGAT
TTCTATGAAA TGCAGGACGC CTATTGA
 
Protein sequence
MSETPSKQTA ASDETGAVVA PEPGPVSQWL NKQGFDHNIL EPDHLGVEQI GVDAAVLPMI 
AAALKSNGFD YLQCQGGYDE GPGEQLVCFY HLLAMAEQVE AMVADPSAKL REVRIKVFLN
REGTPSLPSI YGLFRGADWQ ERETFDMYGI QFEGHPHPKR LLMPEDWKGW PLRKDYVQPD
FYEMQDAY