Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0205 |
Symbol | |
ID | 3736152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 212182 |
End bp | 212748 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637774785 |
Product | NADH dehydrogenase subunit J |
Protein accession | YP_380536 |
Protein GI | 78211757 |
COG category | [C] Energy production and conversion |
COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00876666 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.281377 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGAAA CCCCTTCCAA ACAGACTGCC GCCTCGGATG AAACGGGTGC TGTTGTTGCT CCCGAGCCTG GTCCGGTGAG CCAATGGCTG AACAAGCAAG GCTTTGATCA CAACATCCTC GAGCCTGATC ATCTTGGCGT TGAGCAGATC GGTGTTGACG CTGCCGTTCT TCCGATGATC GCTGCTGCAC TCAAGAGCAA CGGTTTCGAC TATCTGCAGT GCCAAGGGGG CTACGACGAA GGCCCCGGTG AGCAGCTGGT TTGCTTCTAT CACCTGTTGG CGATGGCTGA ACAGGTCGAG GCGATGGTGG CCGATCCCTC AGCCAAGCTG CGGGAAGTGA GGATCAAAGT CTTCCTCAAT CGAGAAGGCA CCCCCTCATT GCCGTCGATC TATGGGTTGT TCCGCGGCGC CGATTGGCAG GAGCGTGAAA CCTTCGACAT GTATGGCATC CAATTCGAGG GACATCCCCA TCCCAAACGG TTGCTAATGC CTGAGGACTG GAAGGGATGG CCTCTGCGAA AAGATTACGT CCAGCCCGAT TTCTATGAAA TGCAGGACGC CTATTGA
|
Protein sequence | MSETPSKQTA ASDETGAVVA PEPGPVSQWL NKQGFDHNIL EPDHLGVEQI GVDAAVLPMI AAALKSNGFD YLQCQGGYDE GPGEQLVCFY HLLAMAEQVE AMVADPSAKL REVRIKVFLN REGTPSLPSI YGLFRGADWQ ERETFDMYGI QFEGHPHPKR LLMPEDWKGW PLRKDYVQPD FYEMQDAY
|
| |