Gene Syncc9605_0087 details

Gene Information

• Locus tag: Syncc9605_0087
• Symbol: gyrB
• ID: 3736337
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9605
• Kingdom: Bacteria
• Replicon accession: NC_007516
• Strand: +
• Start bp: 88692
• End bp: 90659
• Gene Length: 1968 bp
• Protein Length: 655 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637774669
• Product: DNA gyrase subunit B
• Protein accession: YP_380421
• Protein GI: 78211642
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCGACG CTTCCAAGGT CCAGAACGCC TACGGCGCCG AGCAGATTCA GGTGCTGGAG 
GGGCTTGAGC CCGTCCGCAA GCGCCCAGGC ATGTACATCG GCTCCACCGG GCCGCGGGGT 
TTGCACCACC TGGTGTACGA GGTTGTTGAT AACTCGGTGG ATGAAGCCCT GGCGGGCCAT 
TGCGACCGCA TCGTTGTGGT CCTCGGTGAA GACGGCTCCG CCTCAGTGAG CGATAACGGC 
CGCGGCATTC CCACCGATGT GCACCCCCGC ACCGGCAAGA GCGCCTTGGA GACAGTCCTC 
ACGGTGCTGC ACGCCGGCGG AAAATTTGGC GCCGGTGGTT ACAAGGTTTC TGGCGGCCTC 
CACGGCGTTG GCGTTTCGGT GGTGAACGCC CTGAGCGAAT GGGTGCAGGT GACGGTGCGA 
AGGCAGGGCC AGGTGCATCG CCAGCGTTTT GAGCGCGGCG CTGCCATCGG GGTGCTGGCG 
TCGGAGTCGC AGCCTGCAGC TGAATCCGGT GAGACCGGCA CCACCGTCTG CTTCAAGCCC 
GACCTTGAAA TCTTCACCGG CGGCATCGTC TTCGACTACG CCACTCTTTC GGCCCGTTTG 
AGGGAGCTGG CTTATCTGAA CGGCGGCGTG AGGATTGTCT TCCGCGATGA GCGGGAGTCA 
GCCCGGGATG GGGAAGGCAA TCCCCATGAG GAGACTTACT TCTACGAAGG CGGCATCAAG 
GAATACGTCG CCTACATGAA CAAGGAGAAG GACGCCCTTC ATCCGGACAT CATTTACGTG 
AATTCCGAGA AGGATGGCGT CCAAGTGGAG GCAGCCCTGC AGTGGTGCTC CGATGCCTAT 
TCCGACAGCA TCCTTGGCTT CGCCAACAAC ATCCGCACCG TGGATGGCGG CACCCACATT 
GAAGGCTTGA AGACGGTGCT CACCCGCACC CTCAACGCCT TCGCCAAGAA GCTGGGCAAA 
CGCAAGGAAT CAGATTCCAA TCTTGCGGGG GAGAACATCC GTGAAGGCCT GACGGCAGTG 
CTCTCGGTGA AGGTGCCGGA ACCGGAATTC GAAGGTCAAA CCAAGACCAA ACTCGGCAAC 
ACCGAGGTGC GGGGCATCGT CGACAACCTG GTGGGAGAGG CCCTCAGTCA GTTCCTCGAG 
TTCAATCCCT CCGTCATCGG CCTGATCCTC GAGAAGGCGA TCCAGGCGTT TAACGCCGCT 
GAGGCCGCCC GCCGGGCAAG GGAACTGGTG CGGCGCAAGA GCGTGCTGGA GAGCTCAACC 
CTGCCCGGAA AACTTGCTGA TTGCAGCTCT CGCGATCCCG GCGAATCCGA GATCTACATC 
GTGGAGGGCG ACTCCGCCGG TGGCTCGGCC AAGCAGGGCC GGGACCGTCG CTTCCAGGCG 
ATCCTGCCGC TACGGGGCAA GATTCTCAAC ATCGAGAAAA CAGACGACGC CAAGATCTAC 
AAGAACACCG AGATTCAGGC GTTGATCACC GCTTTGGGTC TGGGGATCAA GGGTGAGGAC 
TTCGATGTGA AGAACCTCCG TTACCACCGG GTCGTGATCA TGACCGACGC CGACGTGGAC 
GGCGCCCATA TACGCACCCT GCTGCTCACC TTCTTCTACC GCTATCAGAA GGAGCTGGTG 
GAAGGCGGTT ATATCTACAT CGCCTGTCCG CCGCTCTACA AAGTTGAGCG CGGCAAGAAC 
CACACCTATT GCTACAACGA AGGAGATCTG CAGAAGACCC TGGAGGGCTT CGGCGAGAAG 
GCCAATTACA CGATCCAGCG CTTCAAGGGT CTTGGCGAAA TGATGCCCAA GCAGCTCTGG 
GAAACCACCA TGGATCCCAC CACGCGCACG ATGAAGCGGG TGGAGATCGA AGATGCCCTC 
GAGGCTGATC GCATCTTCAC GATCCTGATG GGCGACAAGG TGGCGCCCCG CCGGGAATTC 
ATCGAGACCC ACAGCGCAGA GCTGGATATG GCGGCTCTCG ACATTTGA 

 

Protein sequence

MSDASKVQNA YGAEQIQVLE GLEPVRKRPG MYIGSTGPRG LHHLVYEVVD NSVDEALAGH 
CDRIVVVLGE DGSASVSDNG RGIPTDVHPR TGKSALETVL TVLHAGGKFG AGGYKVSGGL 
HGVGVSVVNA LSEWVQVTVR RQGQVHRQRF ERGAAIGVLA SESQPAAESG ETGTTVCFKP 
DLEIFTGGIV FDYATLSARL RELAYLNGGV RIVFRDERES ARDGEGNPHE ETYFYEGGIK 
EYVAYMNKEK DALHPDIIYV NSEKDGVQVE AALQWCSDAY SDSILGFANN IRTVDGGTHI 
EGLKTVLTRT LNAFAKKLGK RKESDSNLAG ENIREGLTAV LSVKVPEPEF EGQTKTKLGN 
TEVRGIVDNL VGEALSQFLE FNPSVIGLIL EKAIQAFNAA EAARRARELV RRKSVLESST 
LPGKLADCSS RDPGESEIYI VEGDSAGGSA KQGRDRRFQA ILPLRGKILN IEKTDDAKIY 
KNTEIQALIT ALGLGIKGED FDVKNLRYHR VVIMTDADVD GAHIRTLLLT FFYRYQKELV 
EGGYIYIACP PLYKVERGKN HTYCYNEGDL QKTLEGFGEK ANYTIQRFKG LGEMMPKQLW 
ETTMDPTTRT MKRVEIEDAL EADRIFTILM GDKVAPRREF IETHSAELDM AALDI