Gene Syncc9605_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0083 
Symbol 
ID3736333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp85084 
End bp86085 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content62% 
IMG OID637774665 
ProductGntR family transcriptional regulator 
Protein accessionYP_380417 
Protein GI78211638 
COG category[K] Transcription 
COG ID[COG1725] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGATTCC ATATCCAACA GGAAAGCGAC ATTCCGGCGT CGACGCAGCT CTACAACCAG 
ATCTGTTTTG CCATCGCAGC AAGGCATTAC CCGCCGGGGC ATCGCCTTCC CAGCACCCGG
CAGCTGGCAA TGCAAACCGG ACTGCACCGC AACACGATCA GCAAGGTGTA CCGCCAGCTG
GAAACCGATG GCGTCGTTGA AGCCATGGCC GGCTCTGGCA TCTATGTGCG CGACCAGCAA
AAACCCCGGG AAATCAAAAC GCCTCCACAC ATCCGCAACC GGGGCGTCAC CGACCTCGAC
CGTGAAGTGC GGAAGTGCGT GGATGGCCTG CTGAATGCAG GCTGCACCCT GCAGCAGACC
AGGGAACTGC TGACTCGGGA GATTGACTGG CGCCTGCGCT GCGGAGCCCG CGTGCTGGTG
AGCACGCCGC GGGAAGACAT CGGCGCCTCG ATGCTGATTG CCGAGGAACT GGAACCCTGC
CTAGATGTGC CGGTGGAAGT GGTGCCGCTG GAAGAGCTGG AAAGCGTGCT GGAGAACTCC
AGTAACGGCA CGGTGGTGAC AAGCCGTTAT TTCCTTCAAC CAGTGGAGGA GCTCGCCAAG
AAACACAGCG TCCGCGCCGT GGCCGTTGAC CTGAACGACT TCCGCCAGGA ACTGGCCATG
CTCAAGGAAT TGCGTCCTGG CAGCTGTGTG GGGCTGGTGA GCATCAGCCC CGGCATTCTG
CGGGCTGCGG AAGTGATTCT CCACTCCATG CGTGGCAACG AATTGCTGCT GATGACCGCC
ACCCCGGATG TGGGCAGCCG CCTACTGGCC CTACTGCGGG CCTCCAGCCA CGTGCTCTGT
GATCGACCAA GCCTGCCACT GGTGGAGCAG AGCCTGCGCC AGAACCGCTC CCAGCTGATG
CGCATGCCCC AGGTGCATTG CGCCGAGAGC TACCTCAGCA CCGATACGAT TGATCTACTC
CGCAAGGAGA TTGGCCTGCA GACCCCGGCG GCCGCCAGCT GA
 
Protein sequence
MRFHIQQESD IPASTQLYNQ ICFAIAARHY PPGHRLPSTR QLAMQTGLHR NTISKVYRQL 
ETDGVVEAMA GSGIYVRDQQ KPREIKTPPH IRNRGVTDLD REVRKCVDGL LNAGCTLQQT
RELLTREIDW RLRCGARVLV STPREDIGAS MLIAEELEPC LDVPVEVVPL EELESVLENS
SNGTVVTSRY FLQPVEELAK KHSVRAVAVD LNDFRQELAM LKELRPGSCV GLVSISPGIL
RAAEVILHSM RGNELLLMTA TPDVGSRLLA LLRASSHVLC DRPSLPLVEQ SLRQNRSQLM
RMPQVHCAES YLSTDTIDLL RKEIGLQTPA AAS