Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0081 |
Symbol | secA |
ID | 3736331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 81186 |
End bp | 83990 |
Gene Length | 2805 bp |
Protein Length | 934 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637774663 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_380415 |
Protein GI | 78211636 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAGC TCCTGCTGGG TGATCCCAAT GCCCGCAAGC TGAAGCGTTA CCAGCCGATC GTTTCGGATA TTCAGCTGCT TGAAGAGGAG ATCGCTCCGC TCTCCGACGA TGAGTTACGT GGCAGAACCG CTGCCTTCCA GGAGCGTTTG GCCAATGCCG GCAGTCTGGC GAACCAGCGG CCGATCCTCG ACGAGATCCT GCCTGAGGCC TTTGCCGTTG TTCGTGAAGC CGGCAAGCGG GTGCTGGGCA TGCGTCATTT CGATGTCCAG CTGATTGGCG GCATGGTGCT GCATGAAGGC CAGATCGCCG AGATGAAAAC TGGCGAAGGC AAAACTCTGG TTGCCACCCT TCCGAGCTAC CTCAACGCCC TCACTGGTCG TGGCGTGCAC GTCGTGACGG TGAACGATTA CCTGGCCCGC CGTGATGCCG AGTGGATGGG CCAGGTGCAT CGCTTCCTCG GTTTATCCGT GGGCCTGATC CAGCAGGACA TGCGTCCTGA GGAGCGCCGA CGTAACTACA ACTGCGATAT CACCTACGCC ACCAATTCAG AGCTGGGCTT CGATTACCTG CGCGACAACA TGGCTGCCGA CATCTCGGAG GTGGTGCAGC GGGAGTTTCA GTACTGCGTG ATCGATGAGG TCGATTCGAT CCTGATCGAC GAAGCCCGCA CCCCTCTGAT CATTTCTGGT CAGGTGGAAC GGCCCCAGGA GAAGTACCAG CAGGCGGCCG AGGTGGCCAA TGCCCTTGCT CGCGCTGCCG AGTTAAGCAA AGACGGCATC GATCCCGAGG GGGATTACGA GGTGGATGAA AAGCAGCGCA GCTGCACCCT CACCGATGAA GGCTTTGCCA AGGCCGAGCA GATGCTCGGG GTGGCTGATC TGTTCAACCC CCAGGACCCC TGGGCCCACT ACATCACCAA CGCTCTGAAG GCCAAGGAGC TGTTCGTCAA GGATGTGAAC TACATCGTGC GCGATGGCGA AGCGGTGATC GTGGATGAGT TCACCGGTCG GGTGATGCCT GGGCGCCGTT GGAGTGACGG CCAGCACCAA GCCATTGAGG CCAAGGAGGC CCTTGCGATC CAATCAGAAA CGCAGACCCT CGCTTCGATC ACGTATCAGA ACTTTTTCCT GCTCTATCCC CGCTTGGCCG GCATGACCGG CACGGCCAAA ACGGAAGAGG TTGAATTCGA GAAGACCTAC AAACTCGAAA CCACAATCGT CCCCACCAAC CGGGTCCGGG CGCGTCAGGA CTGGGCCGAT CAGGTTTACA AAACCGAGGC TGCAAAATGG CGCGCTGTGG CCAACGAAAC AGCTGAGATC CACAAGAACG GACGGCCGGT GCTAGTCGGC ACCACCTCGG TGGAGAAAAG CGAACTGCTG AGTTCGCTGC TGGCGGAGCA GGAGATCCCC CACAACCTGC TCAACGCGAA GCCGGAGAAT GTGGAGCGCG AATCGGAGAT CGTCGCCCAG GCGGGTCGGG CTGGCGCTGT GACCATCGCC ACCAACATGG CGGGCCGTGG TACTGACATC ATCCTTGGTG GCAACAGCGA CTACATGGCC CGCTTGAAGT TGCGGGAGGT GCTGCTGGGC CGTCTTGTGA AGCCGGAAGA GGATCACACG CCGCCCGTGC CTTTGCAGCG CAGTGCTCCG GGCGGGTTCT CTGATGCTGC GGCGCCTTCG CTGCCCCGCA GCGGCGAGAG CCTCTATCCC TGCCCCCTCA CCGATGACAC CGATCAAGCC CTCGGCCAGC TGGCGCGTGA TCTGGTCAAG GCCTGGGGCG ATCGTGCCCT CACGGTGATT GAGCTGGAGG AGCGCATCGC CACTGCTGCG GAGAAAGCAC CCACTGAGGC TCCCCAGATT CAGGCATTGC GCGAGGCGAT CGCCCGGGTG AAGGGTGAAT ACGACGCCGT GGTAAAGCAG GAAGAAAGCC GCGTTCGCGA GGCTGGCGGC CTGCATGTGA TCGGCACGGA ACGGCATGAG TCCCGCCGTG TCGATAACCA ACTTCGTGGC CGTGCCGGCC GCCAGGGCGA CCCCGGATCC ACTCGCTTTT TCCTCTCATT GGGCGACAAC TTGCTGCGGA TCTTCGGCGG TGATCGCGTT GCCGGTCTGA TGAATGCCTT CCGCGTGGAG GAAGACATGC CGATTGAATC CGGCATGCTC ACCCGTTCGC TGGAGGGAGC TCAGAAGAAG GTGGAGACCT ACTACTACGA CATCCGCAAG CAGGTGTTCG AGTACGACGA GGTGATGAAC AACCAGCGGC GTGCGGTGTA TTCCGAACGC CGCCGAGTGC TGGATGGCCG TGCTTTGAAG AAGCAAGTGA TCGGTTACGG CGAACGCACC ATGGGAGAAA TCGTGGAGGC CTATGTGAAT CCTGACCTGC CGCCGGAGGA ATGGGATCTC GATCAGCTGG TCGGCAAGGT GAAAGAGTTC ATCTATTTGT TGGAAGATCT CACCCCTGAC CAGGTTCAGG GCCTCGGCAT GGAGGAACTC AAGGCCTTTC TTCAGGAGCA ACTACGCAAT GCCTATGACC TCAAAGAAGG CCAGATTGAG CAACAGCGCC CTGGGCTGAT GCGTGAGGCT GAGCGCTTCT TCATCCTTCA GCAGATTGAT ACCCTTTGGC GTGAACATCT CCAGGCGATG GATGCCCTGC GTGAATCGGT GGGTCTGCGT GGCTACGGTC AGAAAGATCC GCTCATTGAA TACAAGAATG AGGGTTACGA CATGTTCCTT GAAATGATGA CGAATATGCG CCGTAATGTC ATCTATTCAA TGTTCATGTT CCAGCCGCAA GCACCCAAAA ACTAG
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Protein sequence | MLKLLLGDPN ARKLKRYQPI VSDIQLLEEE IAPLSDDELR GRTAAFQERL ANAGSLANQR PILDEILPEA FAVVREAGKR VLGMRHFDVQ LIGGMVLHEG QIAEMKTGEG KTLVATLPSY LNALTGRGVH VVTVNDYLAR RDAEWMGQVH RFLGLSVGLI QQDMRPEERR RNYNCDITYA TNSELGFDYL RDNMAADISE VVQREFQYCV IDEVDSILID EARTPLIISG QVERPQEKYQ QAAEVANALA RAAELSKDGI DPEGDYEVDE KQRSCTLTDE GFAKAEQMLG VADLFNPQDP WAHYITNALK AKELFVKDVN YIVRDGEAVI VDEFTGRVMP GRRWSDGQHQ AIEAKEALAI QSETQTLASI TYQNFFLLYP RLAGMTGTAK TEEVEFEKTY KLETTIVPTN RVRARQDWAD QVYKTEAAKW RAVANETAEI HKNGRPVLVG TTSVEKSELL SSLLAEQEIP HNLLNAKPEN VERESEIVAQ AGRAGAVTIA TNMAGRGTDI ILGGNSDYMA RLKLREVLLG RLVKPEEDHT PPVPLQRSAP GGFSDAAAPS LPRSGESLYP CPLTDDTDQA LGQLARDLVK AWGDRALTVI ELEERIATAA EKAPTEAPQI QALREAIARV KGEYDAVVKQ EESRVREAGG LHVIGTERHE SRRVDNQLRG RAGRQGDPGS TRFFLSLGDN LLRIFGGDRV AGLMNAFRVE EDMPIESGML TRSLEGAQKK VETYYYDIRK QVFEYDEVMN NQRRAVYSER RRVLDGRALK KQVIGYGERT MGEIVEAYVN PDLPPEEWDL DQLVGKVKEF IYLLEDLTPD QVQGLGMEEL KAFLQEQLRN AYDLKEGQIE QQRPGLMREA ERFFILQQID TLWREHLQAM DALRESVGLR GYGQKDPLIE YKNEGYDMFL EMMTNMRRNV IYSMFMFQPQ APKN
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