| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0019 |
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| Symbol | |
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| ID | 3735542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 21023 |
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| End bp | 22105 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637774602 |
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| Product | twitching motility protein |
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| Protein accession | YP_380356 |
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| Protein GI | 78211577 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGA TGATCGAAGC CTTGATGGAA CAACTGGTGC AGGGCGGTGG CAGTGATCTG
CACCTGGCCA CCGGTCAACC GCCCTACGGC CGCTTCAGTG GTGAACTGCG TCCGATGACG
GACCGACCCC TGGCCGAGGA GGAATGCAAC AAACTGATCT TCTCGATGTT GAACAACAGC
CAGCGCAAGA CGCTGGAGCA GACCTGGGAA CTGGACTGCG CCTACGGCCT CAAGGGCGTT
GCACGCTTCC GCGTGAACGT CTACCGCCAG AAAGGCAGCT ATGCCGCCTG CCTGCGAGCC
CTTGGCAGCA CGATTCCCAG CGTTGAACTG CTGAACCTGC CTCCTGTGGT GCTGGAGACC
AGCGCGCGGC CCCGGGGTCT GGTGCTGGTG ACGGGTCCAA CAGGCTCAGG GAAGACAACA
ACCCTGGCGG CTCTGTTGGA TCTCATCAAT CACACCCGCA GCGAACACAT CCTCACGATC
GAAGACCCGA TCGAATTCGT GTACCAGAGC GACAAAAGCC TGGTGCACCA ACGCCAGCTG
AACGAAGACA CCCGCAGCTT CGCCAACGCC TTGCGCGCCG CCCTGCGGGA GGACCCGAAC
GTGATCCTGG TGGGTGAGAT GCGGGATCTG GAGATGATTC AACTGGCGGT GAGTGCCGCC
GAAACCGGAC ATCTCGTCTT CGGAGCCTTG TATACCAGCT CCGCCGCCCA GACCGTGGAC
CGCATGGTCG ACGTCTTCCC ACCGGAACAA CAGACGCAGA TCCGTGTCCA GCTCTCGGGC
AGTTTGGTCG CTGTGTTCTG CCAGACCCTT TGCCGGCGTC AGAACCCGTC AGAAGGACAG
TTCGGTCGGG TGATGGCCCA GGAGATCCTG ATCAACACAC CTGGACCTGG CACCGCCAAC
ATGATCCGCG AGGGGAAAAC AGCCCAGCTC TATTCCCAAA TCCAGACGGG GACAGAACAA
GGTATGCAGA CCCTGGAGAA AGCCTTGGCC AACCTTGTGC TCAATGGGGA TGTATCCCGC
GCCGAAGCGA TGGGCAAAGC CAGCAAACCA GGCGAATTGC AGCGCTTGAT CGGTGAAATC
TGA
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| Protein sequence | MDLMIEALME QLVQGGGSDL HLATGQPPYG RFSGELRPMT DRPLAEEECN KLIFSMLNNS
QRKTLEQTWE LDCAYGLKGV ARFRVNVYRQ KGSYAACLRA LGSTIPSVEL LNLPPVVLET
SARPRGLVLV TGPTGSGKTT TLAALLDLIN HTRSEHILTI EDPIEFVYQS DKSLVHQRQL
NEDTRSFANA LRAALREDPN VILVGEMRDL EMIQLAVSAA ETGHLVFGAL YTSSAAQTVD
RMVDVFPPEQ QTQIRVQLSG SLVAVFCQTL CRRQNPSEGQ FGRVMAQEIL INTPGPGTAN
MIREGKTAQL YSQIQTGTEQ GMQTLEKALA NLVLNGDVSR AEAMGKASKP GELQRLIGEI
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