Gene Syncc9605_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0004 
Symbol 
ID3735742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp4554 
End bp6011 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content52% 
IMG OID637774587 
Productamidophosphoribosyltransferase 
Protein accessionYP_380341 
Protein GI78211562 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase 
TIGRFAM ID[TIGR01134] amidophosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.970099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGCA TTATCGGAAT GTTGTGTGTT GACTCAGTCA ACCAACAGAT CTACGACAAT 
CTGCTTCTGC TTCAGCACCG TGGTCAGGAC TCAGCAGGGA TTGTCACGAT GGACAATCAC
ACATTCCACG TGCACAAACA AAGGGGACGT GTGCGTGAAG CCTTTCGCAC ACGAGACATG
CGAAAGCTTC TGGGCAATGC CGGGATCGGT CACGTTCGTT ATGCCACCCG TGGTGCTGCT
GCATCAGAAG AGGAAGTTCA GCCGTTCTAT GTGAATGCCC CGTATGGCAT CACTTTTGTT
CATAACGGCA ATCTCACCAA CACCCATCAG CTTGAGCAGG ATCTGTTCAA GATTGATCGT
CGTCACACCA ATTCGACCAG TGATACGGAG ATGCTGGTCA ATGTGTTGGC CACGGAGATT
CAATCTCAGC TCACAGGCCG TGATCTGACA CCGGATCAGT TGTTTAATGC GGTGGCATCA
CTGCATCACC GCGTTCAGGG TTCCTACGCA GCGATCGCTT TGATAGCGGG CCACGGAATG
CTGGCGTTTC GGGACCCCTA TGGAATTCGT CCTCTGATTC TCGGCAGGCG GTTGTCTGAA
CAGGGACGAG AGGAGTGGAT TGTCGCCAGT GAATCCCTGG TGATTGAAAA CAGCGGCTAC
GAGATCGTTC GTGATGTTGA CCCTGGAGAA GCGGTGTTCA TTGATGTTGA TTCGAACTTG
CATCAGCGTC AGTGTGCGGA TTCTCCACGA TTGATTCCCT GCGCATTTGA GTACGTGTAT
TTGGCGCGGC CGGATTCCGT CATGAACGGT ATTTCGGTGT ATGAGTCCCG GCTGCGCATG
GGTGATCGCT TGGCTCAAAC CATTGCCGAA ACGTTGCCTG CGGGTGATAT CGATGTTGTG
ATGCCGATTC CTGATTCAGC TAGGCCTTCG GCGATGCAGG TGGCCAAGCG ATTGGGTCTC
GATTATCGCG AAGGCTTTTA CAAAAACCGC TATGTCGGCC GAACCTTCAT CATGCCGGGT
CAAGCTGAAC GTAAGAAGTC AGTTCGGCAG AAACTCAACG CTCTCGGTAC TGAATTTGCC
GGCAAGAATG TCTTGATTGT GGACGATTCG ATTGTTCGTG GCACAACGTC CCGCGAGATT
GTTCAGATGG CACGCAGCGC TGGTGCTAAC AAGGTGACGT TCACGTCGGC TGCTCCACCG
GTTCGCTATC CCAATGTTTA TGGGATCAAC ATGCCAACCC GGGCGGAACT CCTGGCCCAC
GGCCGAACCA GTGATGAGAT TTCAGATGTC CTTGGTGCTG ATCATGTTGT TTACCAGACC
GTTGAGAATC TGCTGGAAAG CATTGTTGAA AACACTGAGA TCAAGGACCT CGAGATGTCT
TGTTTTGATG GCCACTATGT GACCGGCGGA ATCGATGAAG ATTATTTCCA ATGGCTGGAG
CGGAATTGCA GCTCCTGA
 
Protein sequence
MCGIIGMLCV DSVNQQIYDN LLLLQHRGQD SAGIVTMDNH TFHVHKQRGR VREAFRTRDM 
RKLLGNAGIG HVRYATRGAA ASEEEVQPFY VNAPYGITFV HNGNLTNTHQ LEQDLFKIDR
RHTNSTSDTE MLVNVLATEI QSQLTGRDLT PDQLFNAVAS LHHRVQGSYA AIALIAGHGM
LAFRDPYGIR PLILGRRLSE QGREEWIVAS ESLVIENSGY EIVRDVDPGE AVFIDVDSNL
HQRQCADSPR LIPCAFEYVY LARPDSVMNG ISVYESRLRM GDRLAQTIAE TLPAGDIDVV
MPIPDSARPS AMQVAKRLGL DYREGFYKNR YVGRTFIMPG QAERKKSVRQ KLNALGTEFA
GKNVLIVDDS IVRGTTSREI VQMARSAGAN KVTFTSAAPP VRYPNVYGIN MPTRAELLAH
GRTSDEISDV LGADHVVYQT VENLLESIVE NTEIKDLEMS CFDGHYVTGG IDEDYFQWLE
RNCSS