| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_2028 |
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| Symbol | |
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| ID | 3748001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 2566954 |
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| End bp | 2568387 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637774565 |
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| Product | 23S rRNA methyltransferase/RumA |
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| Protein accession | YP_380319 |
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| Protein GI | 78189981 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGCAG ATATGCAGTA CCGTAAGGGC GATGTTATTT CGCTACAAGT GATTGATCTT
GCTGAAAAAG ATAGTGCCGT TGGACGGCTT GAAAGTGGCA TAACGGTTAT GCTTTCAGGG
ATGGTAGCAA TTGGTGACCA TGTTTCAGCT CGCATCACCA AAGTGCGTCA ACGCTATCTT
GAGGCTGCAA CGCTTGACAT TTTAGAACCC TCACCCGAAC GCACAACGCC TGTTTGCTCT
TACTTTGGCG TGTGCGGTGG TTGCAAACTG ATGCACGTTT GTAATGAAGC GCAGTTACGC
TACAAGCAAA AAAAGGTAAG CGACGCTTTA AAGCACCTTG GTGATTTTGT AGAGCCTCCT
GTTGCCTCTG TACTTGCAGG CACATCGCCA CTCCATTACC GAAACAAAAT GGAGTTTTCC
TTTGCGGCGA AACGCTATCT CATGCCCGAA GAGCTTTCGC TTACGGAGCT TTCGCGCTCA
AAAGAGTTTG CACTTGGCTT CCACACGCCC GGTAATTTTG AAAAGGTGAT TGATATTGAC
TACTGCTACC TTGCTCGCAA TGAGATGAAT CAGGTGCTGG AACTTACTCG TCGTTTTGCG
CTGCAACATG CTCTTCCTCC TTATTCCGTA AAAACGCATA CGGGCTTTTT GCGCAACCTT
GTGGTACGTT TTAGTGAGCA TACACAAGAG CTTATGGTGA ACCTTGTAAC CTCGTGGCAC
GATGCCGAGG TGATGGCACG CTATAGCGCT ATGCTGCATC ATGCTATGCC TGAGCAAAAA
ATGACGGTGG TCAATAACAT TACCAGCCGA AAAAATGGGG TTGCCACAGG TGAAGAGGAG
GTGGTGATAA GCGGAGAGGG ATTTATTACC GAACGTTTAT GTGGACTTGA TTTTCGCATT
TCAGCAAACT CGTTTTTTCA AACCAACTCC GCACAAGCGG AAGTGCTTTA CCAAACGCTG
CTTGCGGTTG CTGATTTACA GCCAACCGAT ACGGTGTATG ACCTCTATTG CGGTACCGGC
ACGATTACGC TGTGCATGGC AGCACACTGC CACCAAGTGA TTGGCTTAGA GGTGGTTGAA
AGTGCTATTC GCGATGCGCA AAACAATGCA CTCCGTAACG GCATTACGAA CGCTCATTTT
TTATTAGCCG ATTTAAAAGA TTTCCATACC CTGCTTCCAT TACTTGAAGA GCATGGCAAG
CCTCGTGTGA TTGTAACCGA TCCCCCTCGC GCAGGAATGC ACCCAAAAGC GTTAGCAACA
ATGGTGCAGC TTCAACCTGA GCGCATTATT TATGTGAGTT GTAATCCAGC AAGCCTTGCT
CGTGATGGCA AGGAACTCGC AGCACAAGGT TATTCGTTAC GTTCAGTGCA GCCGGTTGAA
ATGTTTCCAC AAACCAATCA CATTGAGAGC GTTGGTTGTT TTGTGAAGGT GTAA
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| Protein sequence | MMADMQYRKG DVISLQVIDL AEKDSAVGRL ESGITVMLSG MVAIGDHVSA RITKVRQRYL
EAATLDILEP SPERTTPVCS YFGVCGGCKL MHVCNEAQLR YKQKKVSDAL KHLGDFVEPP
VASVLAGTSP LHYRNKMEFS FAAKRYLMPE ELSLTELSRS KEFALGFHTP GNFEKVIDID
YCYLARNEMN QVLELTRRFA LQHALPPYSV KTHTGFLRNL VVRFSEHTQE LMVNLVTSWH
DAEVMARYSA MLHHAMPEQK MTVVNNITSR KNGVATGEEE VVISGEGFIT ERLCGLDFRI
SANSFFQTNS AQAEVLYQTL LAVADLQPTD TVYDLYCGTG TITLCMAAHC HQVIGLEVVE
SAIRDAQNNA LRNGITNAHF LLADLKDFHT LLPLLEEHGK PRVIVTDPPR AGMHPKALAT
MVQLQPERII YVSCNPASLA RDGKELAAQG YSLRSVQPVE MFPQTNHIES VGCFVKV
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