| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1990 |
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| Symbol | dapD |
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| ID | 3747369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 2526881 |
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| End bp | 2527744 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637774527 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_380281 |
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| Protein GI | 78189943 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATAA CCATACAAGA AGTACAAGCG GCTATTGAGC GCTATTTGCC ATTAACCCCG
CAAGAGCTGC AAGCAAATAA CGATGTACGG CTCATGTTTG AAGCCTTTAA ACAGCTTTTA
AACAATGGAG TTATTCGTTC AGCCGAAAAA GTTGGCGATG CTTGGCAGGT GAACATGTGG
GTTAAGCAAG GCATTTTGCT TGGCATGAAG CTTGGGCGCT TACAAGAAAT GCTACTCCCT
TTTGGCGGAC GTAGTGGCTT TACCTTTATT GAAAAAGATA CATGGCCATT AAAAGAGGTG
GGGATTGGGC ACAACGTGCG CATTGTGCCG GGCGGCTCCT CTGTGCGCGA CGGCGTCTAT
CTTGCACCCG GTGTGGTGAT GATGCCTCCC GCTTACGTCA ACGTTGGTGC TTATGTAGAT
GAGGGCACCA TGATTGATTC CCATGCCCTT GTTGGCAGTT GTGCCCAAGT GGGTAAAAAA
GTACATCTTT CAGCAGGCGT GCAAGTTGGC GGCGTGCTGG AACCTGTTGG CGCCCTCCCG
GTTATTATTG AGGATGAAGT TATGGTTGGC GGCAACTGCG GCATTTACGA AGGCACCATT
GTAAAAGAGC GCGCCGTAAT AGGCACGGGC GTTATTCTTA ATGGTTCCAC GCCTGTTTAT
GACACCGTTA ACAACTGTGT GTATCGCAAA AGTGCTGAGG CTCCGCTTAT CATTCCTGCG
GGTGCGGTGG TTGTTGCTGG CTCACGTCCG CTAAAGGGTG ATTTTGCGGC TGAACACGGG
CTTGCCATCT ACACCCCAAT TATTGTAAAA TATCGCGATA GCCGCACCGA TAGCGCGACT
GCACTTGAAG AGGCACTTCG CTAA
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| Protein sequence | MSITIQEVQA AIERYLPLTP QELQANNDVR LMFEAFKQLL NNGVIRSAEK VGDAWQVNMW
VKQGILLGMK LGRLQEMLLP FGGRSGFTFI EKDTWPLKEV GIGHNVRIVP GGSSVRDGVY
LAPGVVMMPP AYVNVGAYVD EGTMIDSHAL VGSCAQVGKK VHLSAGVQVG GVLEPVGALP
VIIEDEVMVG GNCGIYEGTI VKERAVIGTG VILNGSTPVY DTVNNCVYRK SAEAPLIIPA
GAVVVAGSRP LKGDFAAEHG LAIYTPIIVK YRDSRTDSAT ALEEALR
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