| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1983 |
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| Symbol | |
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| ID | 3747362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 2515296 |
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| End bp | 2518592 |
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| Gene Length | 3297 bp |
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| Protein Length | 1098 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637774520 |
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| Product | alpha amylase domain-containing protein |
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| Protein accession | YP_380274 |
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| Protein GI | 78189936 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
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| TIGRFAM ID | [TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCAAC CCGAACCCCT CTGGTACAAA GACGCCATTA TTTACGAGGC GCACGTTAAA
ACCTTTTACG ATAGCGATAA TGATGGCATT GGCGATTTTC AAGGATTGCG CCAAAAGCTT
GGTTACTTGC AAAGTCTTGG TATTACGGCA ATTTGGTTGC TTCCCTTTTA TCCCTCGCCA
CTGCGTGATG ATGGATACGA TATTGCTGAT TACATGACGG TTAACCCCGA TTATGGCACT
ATGGATGATT TTCGTGCCTT TCTTGAGGAG GCGCATTCAT TGGGCTTAAA GGTGATTACC
GAGTTGGTTG TAAACCACAC CTCCGACCAA CATGCGTGGT TCCAGCGTGC GCGCCATGCA
CCAAAGGATT CGCCTGAGCG CAATTTTTAT GTGTGGAGCG ATGATCCCAA CAAATATTCC
GAAACGCGCA TCATTTTTCA AGATTTTGAA GCCTCTAACT GGACGTATGA TTCCGTTGCA
GGGCAATATT ATTGGCATCG CTTTTACCAC CATCAGCCCG ATTTAAATTT TGAAAATCCT
GCGGTTCATG CTGCCTTGCT CCATGTGCTT GACTTCTGGC TTGGCATGGG CGTTGATGGG
CTTCGTCTCG ATGCGGTGCC TTACCTGTAT GAGGAAGAGG GCACCAATTG CGAAAATCTC
CCCAGAACCT ATCAGTACCT GCGTGATTTA CGCTCTTATA TTGATGAAAA ATATCCCAAC
CGCATGTTGC TTGCCGAAGC CAATCAGTGG CCCGAAGATT CGGCAGCATA TTTAGGCAAT
GGCGATATGT GCCATATGAA CTTCCACTTC CCGCTCATGC CACGTATGTA CATGGCGTTA
GCAACGGAAG ATCGCTTCCC TATTCTTGAT ATTCTTGAGC AGACGCCCGA AATTCCAGAA
AGTTGCCAAT GGGCATCTTT TTTGCGTAAC CACGATGAGC TAACGCTTGA AATGGTAACC
GACGAAGAGC GCGACTACAT GCGCCGTGTG TATGCCAATG ATCCTCGTGC CCGCATTAAC
CTTGGTATTC GTCGCCGTCT TGCGCCGCTC ATGTCGAATG ATCGCCGCAA AATTGAGCTG
ATGAACATTA TGCTGCTCTC TTTGCCCGGC ACCCCTGTGC TTTACTACGG CGATGAAATT
GGTATGGGTG ATAACTTCTA CCTTGGCGAT CGTGATGGCG TGCGTACCCC AATGCAGTGG
AATGCTGACC GCAACGCTGG CTTTTCGCGT GCTAATCCGC AACGCTTGCA ACTGCCTGTT
ATTATTGATC CCGAATACCA TTACGAAGCC GTAAACGTGG AGGTGCAAGA GAGCAACATC
CATTCGCTTT TGTGGTGGAT GCGCCAAACT ATTTCCACAG CTCATCGTCA TAAAGCTTTT
AGCCGTGGCA CTATTGAGTT CCTACCCGTC AAAAATTCTA AGGTACTCTC TTTTATTCGT
CAATATGAAG ACGAAACCAT GCTCTGCGTT ATTAACCTTT CGAAAAATGC ACAGGCTGTA
ACAGTTGATC TTTCTCGTTT TAATGGTTAC ACGCCCGAAG AGGTTTTTAG CTTAAACCGT
TTCCCCAAAA TTAGAAGCAC GCCTTACATG TTGGCGCTTG GCGCTTATGG ATACTTCTGG
CTCAAATTAA TTAAGGAGGA AAAAGAGGTT GATCGCCATG CGTTGCTTGA TGGCTCTGTA
GTAAGCGTGA ACCGTTGGCA ATCACTCTTT ATTGGGAAAA ATCGCGAAAA GCTTGAAACG
GCTGTTTTTT CAAGCTATTA CATGGCAGCA CGCTGGTTTG GAGGCAAAGC ACGCACCATC
ATCCGCATCT CAATTACCGA TACCATTCCT ATTGCGAATG TAGCTAATAC CAAGTTGTTA
GTAACTGAAG TGCGCTATTC AAGTGGTGAA AATGAGAACT ATCAGTTGCC AGTAACCTTT
GTACCGCTTG CAAACCTTCA GCCATCCGAT GAGTACTTTA GCAAGCAAGT TATTGCTCGC
ATAACTGTTG GCGATGAAGA GGGTTACCTT TGCGATGCTA CCTTTACACC TGCATTTTTG
CAAGAGCTGT ATAGCGTTGC AACCGCTAAA GGCTCATGGC AAGGCAAACA AGGCGTGGTA
AACGGTAGTT CGGCTCCAAA GCTTGCCGCT TTTCTTGCCA ATGTAGCTGA TGCAGCGCCC
GAGCTGATGG GTGCAGAGCA AAGCAACACC TCAATTCGCT ATGCCGATAA TCTTTGCTTA
AAGCTTTATC GCCGCATTGA ATCGGGTGTT TCGCCTGAGG TTGAAATGTG CAGCGCCTTG
AGTGAGCGCA CAAGTTTTAC CAATTTGCCA ACCTATCTTG GCACAGTGAA CTATAGCCGC
AGCCGTAGCA GCCGCTGTTC CATTGGCATT TTACAAACCT ACGTGCCAAA CCAAGGCGAC
GCATGGCAAC TTTCGCTTGA CCAAGCACGC CGCTACTTCG ATGCCATCCA TTCAGCCTTA
CCAAATGCGC TTGCCATGCC AGCTTTACCT GCATTAAGTG GCAATCCAGC TCCACTGCCC
GAATTAATGC AAGAGCTTAT TGGGGGGCAT TATCTTGGTA TGATTGAAAA GCTTGCCGAG
CGCACTGCCG AAATGCACCT TGCCCTTGCA ACGCTCGAAA GCGATCCCGC TTTTGCGCCC
GAAGCCTTTA CTTCGCTTTA TCAGCGCTCC ATTTACCAAG CCATGTGCGA ACAAGTAAAG
CGTTCGGTTA TTTTAATTCG TGAGCTACTT CCATCCCTAA ACGGAGAGCA GCAAACGCTT
GCTACACAGT TCGTGCAAAA GCAAAAGCAA ATTCTGCAAC AGTTTGATCC TATTCGTACC
GAAAAAATTG AAGCCCTAAA AATTCGCATT CACGGCGATT ACCATCTTGG GCAGGTGCTC
TTTACGGGTA AGGATTTCAC CATTATTGAT TTTGAAGGTG AGCCAGCACG TCCGCTTTCG
GAGCGTAAAA TTAAGCGCTC AGTTTTTCGT GATGTGGCTG GAATGCTTCG CTCATTTGAT
TACGCCGCCT TTAGCGCATT GCGTCAAATT GCACCAACCC TTCGCCCCGA CGAGTTGCCA
ATGCTTGACG CATGGGCAGA GCGCTGGAGT TTTTACGTGG GGCAGCACTT TATTAACCGC
TATTTTGAAG CCACTAATGG TAGCTCTATT GTGCCCGTTG AGGCTCCACA GCGTGAGCAC
TTGCTGCGCG GCTACTTAAT GAACAAAGCG ATTTATGAGT TGAATTATGA GCTAAACAAC
CGTCCCGATT GGGCAGCAAT TCCATTACGT GGTATTTTAA AGCTCATAGA GCAATAA
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| Protein sequence | MYQPEPLWYK DAIIYEAHVK TFYDSDNDGI GDFQGLRQKL GYLQSLGITA IWLLPFYPSP
LRDDGYDIAD YMTVNPDYGT MDDFRAFLEE AHSLGLKVIT ELVVNHTSDQ HAWFQRARHA
PKDSPERNFY VWSDDPNKYS ETRIIFQDFE ASNWTYDSVA GQYYWHRFYH HQPDLNFENP
AVHAALLHVL DFWLGMGVDG LRLDAVPYLY EEEGTNCENL PRTYQYLRDL RSYIDEKYPN
RMLLAEANQW PEDSAAYLGN GDMCHMNFHF PLMPRMYMAL ATEDRFPILD ILEQTPEIPE
SCQWASFLRN HDELTLEMVT DEERDYMRRV YANDPRARIN LGIRRRLAPL MSNDRRKIEL
MNIMLLSLPG TPVLYYGDEI GMGDNFYLGD RDGVRTPMQW NADRNAGFSR ANPQRLQLPV
IIDPEYHYEA VNVEVQESNI HSLLWWMRQT ISTAHRHKAF SRGTIEFLPV KNSKVLSFIR
QYEDETMLCV INLSKNAQAV TVDLSRFNGY TPEEVFSLNR FPKIRSTPYM LALGAYGYFW
LKLIKEEKEV DRHALLDGSV VSVNRWQSLF IGKNREKLET AVFSSYYMAA RWFGGKARTI
IRISITDTIP IANVANTKLL VTEVRYSSGE NENYQLPVTF VPLANLQPSD EYFSKQVIAR
ITVGDEEGYL CDATFTPAFL QELYSVATAK GSWQGKQGVV NGSSAPKLAA FLANVADAAP
ELMGAEQSNT SIRYADNLCL KLYRRIESGV SPEVEMCSAL SERTSFTNLP TYLGTVNYSR
SRSSRCSIGI LQTYVPNQGD AWQLSLDQAR RYFDAIHSAL PNALAMPALP ALSGNPAPLP
ELMQELIGGH YLGMIEKLAE RTAEMHLALA TLESDPAFAP EAFTSLYQRS IYQAMCEQVK
RSVILIRELL PSLNGEQQTL ATQFVQKQKQ ILQQFDPIRT EKIEALKIRI HGDYHLGQVL
FTGKDFTIID FEGEPARPLS ERKIKRSVFR DVAGMLRSFD YAAFSALRQI APTLRPDELP
MLDAWAERWS FYVGQHFINR YFEATNGSSI VPVEAPQREH LLRGYLMNKA IYELNYELNN
RPDWAAIPLR GILKLIEQ
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