Gene Cag_1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1978 
Symbol 
ID3747356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp2509542 
End bp2510042 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content46% 
IMG OID637774514 
Productrubrerythrin 
Protein accessionYP_380269 
Protein GI78189931 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.603623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACAA CCCATGAGAA TCTTAAAAAT GCTTTTGCAG GCGAAAGCCA AGCATTTATG 
AAATACACCG CTTTTGCAAA AAAGGCAGAA AAAGATGGTT TTGCCAACAT TGCAAAGCTT
TTTAGAACGA CGGCTGAAGC TGAAAAAATT CATGCCGAAG GGCACCTTTC TGCTGACGAT
GCAATTCAAA CAACGGCAGC CAACCTTGAA ACCGCAATTG GTGGCGAAAC CTACGAGCAC
AACGAAATGT ATCCACCAAT GTACGAGCAA GCGGTTGCTG AAGGGCACAA AGCAAAGCGT
ATGTTTGGTT TTGCCGTAGA GGCTGAACAG GTACATGCAG CGTTGTATCG TAAAGCGCTT
GATGCGGTAC AAAATGGTCA AGACCTTAGC GAAAGCAACA TTTGGCTCTG CCCTGTGTGC
GGTCATATTG AGCTTGGTAA CCCACCAGCC AACTGCCCAA TTTGCAACGT TAAAGCTTCG
GTTTACGTGC AAGTAAGCTA A
 
Protein sequence
MPTTHENLKN AFAGESQAFM KYTAFAKKAE KDGFANIAKL FRTTAEAEKI HAEGHLSADD 
AIQTTAANLE TAIGGETYEH NEMYPPMYEQ AVAEGHKAKR MFGFAVEAEQ VHAALYRKAL
DAVQNGQDLS ESNIWLCPVC GHIELGNPPA NCPICNVKAS VYVQVS