| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1938 |
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| Symbol | |
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| ID | 3746698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 2469736 |
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| End bp | 2471013 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637774473 |
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| Product | Sel1 repeat-containing protein |
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| Protein accession | YP_380229 |
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| Protein GI | 78189891 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGTTA TGAAAAAATT TATCACAAGC ATTGTTATAG CAAGTTTAAC GCTGTTGGCG
ATTAATGGAT TTTGTGAAAC ACCCTCACAA AAACAAATAT CTCAATGGCA ACAAGCTGCT
GCGCAAGGTA ACTCAGAAGC ACAATTAAAT CTTGGTTATG CCTATGATCA TGGAGAAGGA
GTGAAGCAAG ATTATGCGGA GGCGATAAAA TGGTATCGGT TGTCGGCAGC TCAAGGTGAT
GTTAAAGCAC AATTTAATCT TGGGGTGATG TATTATAACG GTGAAGGAGT AAAGCAAGAT
TATGCAGAGG CGATAAAATG GTTTCGTTTA TTAGCAACTC AAGGTGATGC AATAGCACAA
TTTAATCTTG GGGTGATGTA TTATAACGGT GAAGGCGTGA AGCAAGATTA TACAGATGCG
TTGAAATGGT TTCAGTTATC AGCAGCTCAA GGAAATGCAA TGGCACAAAA CAATCTTGGT
GTGATGTATG CTAAAGGTGA AGGCGTGCAG CAAGATTATG CAGAAGCGTT GAAATGGCAT
CGTTTATCAG CAGCACAAGG CAATGCAATG GCACAAAACA ATCTTGGAGC GATGTATTAT
AAGGGTGAAG GAGTCGAGCA AGATTATGTG GAGGCACTAA AATGGTATCG GTTATCGGCA
GCACAAGGAG ATGCGGTTGC GCAATGGATT CTCGGTTTGA TGTACTATGA AGGTCAAGGA
GTAAGGCAAG ATTACGGAGA AGCGATAAAA TGGTATCGTT TATCAGCGGC TCAAGAAGAT
GCGAAAGCGC AATATAACCT TGGCTTGATG TACTACAATG GTGAAGGTGT GAAGCAAGAT
TATGCCGAAG CGTTGAAATG GCATCGTTTA TCAGCAGCAC AAGGCAATGC AATGGCACAA
AACAATCTTG GAGCGATGTA TGCTAAAGGT GAGGGCGTGC AGCAAGATTA TGCAGAAGCG
TTGAAATGGC ATCGTTTATC AGCAGCTCAA GGTGATGCCA CAGCACAAGG TATTCTCGGT
TTGATGTACT GTGAAGGTTA TGGAGTAAGG CAAAATTACG GAGAAGCGCT AAAATGGTAT
CGTTTATCGG CAGCTCAAGG AAATGCAGGT GCACAATACA ATCTTGGTCT GATGTATTAT
AACGGTACAG GTGTTAGGCA GAGTAAAGCA ATTGCAAAAG AGTGGTTTGG CAAAGCTTGT
GATAATGGTT TCCAAGATGG ATGTGATGCA TATCGGGAGT TAAATGAAGC TGGGGCAAAA
ACTAATAGGA GCCGGTAA
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| Protein sequence | MNVMKKFITS IVIASLTLLA INGFCETPSQ KQISQWQQAA AQGNSEAQLN LGYAYDHGEG
VKQDYAEAIK WYRLSAAQGD VKAQFNLGVM YYNGEGVKQD YAEAIKWFRL LATQGDAIAQ
FNLGVMYYNG EGVKQDYTDA LKWFQLSAAQ GNAMAQNNLG VMYAKGEGVQ QDYAEALKWH
RLSAAQGNAM AQNNLGAMYY KGEGVEQDYV EALKWYRLSA AQGDAVAQWI LGLMYYEGQG
VRQDYGEAIK WYRLSAAQED AKAQYNLGLM YYNGEGVKQD YAEALKWHRL SAAQGNAMAQ
NNLGAMYAKG EGVQQDYAEA LKWHRLSAAQ GDATAQGILG LMYCEGYGVR QNYGEALKWY
RLSAAQGNAG AQYNLGLMYY NGTGVRQSKA IAKEWFGKAC DNGFQDGCDA YRELNEAGAK
TNRSR
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