Gene Cag_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1883 
Symbol 
ID3746782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand+ 
Start bp2394177 
End bp2395148 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content49% 
IMG OID637774420 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein-like 
Protein accessionYP_380176 
Protein GI78189838 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA TTCTTGAACT GAAAAATCTT CGCACCTACT ATGCCACCAG CAATGGTATC 
GCAAAGTCGG TAGATGGTGT AAGTTTTTCG CTACAGCGCA ACCGTACACT GGGGGTTGTA 
GGCGAATCGG GATGCGGTAA ATCGGTAACA GCGCTTTCGA TTATGCGCTT AGTGCCCATG 
CCGCCCGGTT ATTTTGCGGG TGGCGAAATT TTTTGGAACG GCACCGATTT GCTCAAGCTC 
TCCGAAGAAA AAATGCGCGC TATTCGTGGC AATGAAATTG CTATGATTTT TCAGGAACCA 
ATGAGCTCGC TCAACCCTGT TTTTACCTGC GGCAACCAAA TTATGGAACA GATTCTTATC 
CATCGCCCAC TTAGTCAGCA GGAAGCGAAA GAGCGTTCTA TTGAACTATT GCGCTTAGTT 
GGCATTGCCA ATCCAGCCGC TCGTTTTTCC TCTTACCCCC ATGAGCTTTC AGGCGGTATG 
CGCCAACGCG TTATGATTGC TATGGCACTC TCCTGCAATC CAGCCTTGCT TATTGCTGAC 
GAACCGACCA CTGCGCTTGA TGTTACCGTG CAGGCACAAA TTCTCGATCT TATGGGCACT 
CTGCAAGCCG ATAACGGTAT GAGTGTTATG CTTATAACGC ACGACTTTGG CGTGGTTGCA 
GAACTTTGTG AAGAGGTGCT GGTAATGTAT GCCTCCAAAG TGGTGGAGCA AGGTTCAGTA 
AAGCAACTCT TTGCCAATCC GCTGCACCCC TACACTCGCG GGTTACTGCA ATCCATTCCA 
CGACTTGGGC ATCGCCATGA ACGCTTACAT GTTATTGAAG GAAGTGTACC AAGCGCATTG 
AACATGCCCA TTGGCTGCCG ATTTGCAGGT CGCTGCTCAC TTGCCGATGC AGAGTGCCGT 
GCTACGGAGC CACCAATGCA GGTTGCTGAA GCTGGGCACA GTGTGGCGTG CTGGAAATAT 
GCTTTTTCAT GA
 
Protein sequence
MEKILELKNL RTYYATSNGI AKSVDGVSFS LQRNRTLGVV GESGCGKSVT ALSIMRLVPM 
PPGYFAGGEI FWNGTDLLKL SEEKMRAIRG NEIAMIFQEP MSSLNPVFTC GNQIMEQILI 
HRPLSQQEAK ERSIELLRLV GIANPAARFS SYPHELSGGM RQRVMIAMAL SCNPALLIAD 
EPTTALDVTV QAQILDLMGT LQADNGMSVM LITHDFGVVA ELCEEVLVMY ASKVVEQGSV 
KQLFANPLHP YTRGLLQSIP RLGHRHERLH VIEGSVPSAL NMPIGCRFAG RCSLADAECR 
ATEPPMQVAE AGHSVACWKY AFS