| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1852 |
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| Symbol | rpsJ |
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| ID | 3747233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 2360158 |
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| End bp | 2360469 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637774390 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_380146 |
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| Protein GI | 78189808 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00631354 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCTGTAC AGCAAAAGAT TAGAATCAAG CTCAAATCAT ACGATCATAG CTTGGTTGAT
AAGTGGGCTC TTAGAATTAT TGATGTCGTC AAACAGACGG ATGCAATTAT TTTCGGACCA
ATTCCGCTGC CGACCAAATC ACATGTTTAC ACCGTTAACC GGTCTCCACA TGTTGATAAA
AAGTCTCGCG AGCAGTTTTC ATTTTCCTCT CATAAGAGGT TGATTGAAAT TATGAACCCG
ACATCCCGAA CTATTGATAT GCTGATGAAG CTTGAGCTTC CCAGCGGCGT TGATGTTGAA
ATCAAGTCTT AA
|
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| Protein sequence | MAVQQKIRIK LKSYDHSLVD KWALRIIDVV KQTDAIIFGP IPLPTKSHVY TVNRSPHVDK
KSREQFSFSS HKRLIEIMNP TSRTIDMLMK LELPSGVDVE IKS
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