Gene Cag_1850 details

Gene Information

• Locus tag: Cag_1850
• Symbol: rplD
• ID: 3747231
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: -
• Start bp: 2358855
• End bp: 2359481
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637774388
• Product: 50S ribosomal protein L4
• Protein accession: YP_380144
• Protein GI: 78189806
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.264817
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACTGA AAGTTTTAAA TACTGCTGGC ACTGAAACCG GTGAAGTCGT AATTCTTCGC 
GACGATATAT TTGGCATTGA AATTTCAGAA CATGCAATGT ATCTGGATGT AAAGTCTATA 
CTTGCAAACA AGCGCCAAGG TACACACAAA GCCAAGACTC GCAGTGAGGT TCGTGGTGGT 
GGTAAAAAGC CATTCCGCCA AAAAGGTACT GGTAATGCAC GTCAAGGCTC AAGCCGCTCT 
CCAATTCATG TTGGTGGTGG TACTATTTTT GGACCGCAAC CACACACGTA TGAGCAAAAA 
GTTAACAAAA AAGTGAAACT ACTTGCTCGT CGTTCAGCTC TTAGTGCAAA AGCGCAAGCT 
GGTAAGATTG TAGTGGTAGA TGATTTTCGT TTTGATGCTA TTAAAACTAA GCCGTTTGCA 
GATATTCTGA AAAATCTTGG TTTAGATGCA AAGAAAACGT TATTGCTTAT GCCTGAGTAC 
GACATGGTAG TTAACCGTTC AGGACGCAAT ATTGCAAAGC TTGAAATTAT GACTGCTGAT 
AAAGCATCTA CTTACGATAT TTTATACAGC AACACGCTTC TGGTGCAAAA AAGTGCTTTG 
AAAACAATTG ATGAGACTCT GGGTTAA 

 

Protein sequence

MELKVLNTAG TETGEVVILR DDIFGIEISE HAMYLDVKSI LANKRQGTHK AKTRSEVRGG 
GKKPFRQKGT GNARQGSSRS PIHVGGGTIF GPQPHTYEQK VNKKVKLLAR RSALSAKAQA 
GKIVVVDDFR FDAIKTKPFA DILKNLGLDA KKTLLLMPEY DMVVNRSGRN IAKLEIMTAD 
KASTYDILYS NTLLVQKSAL KTIDETLG