Gene Cag_1834 details

Gene Information

• Locus tag: Cag_1834
• Symbol: rpsE
• ID: 3746465
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: -
• Start bp: 2351443
• End bp: 2351961
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637774372
• Product: 30S ribosomal protein S5
• Protein accession: YP_380128
• Protein GI: 78189790
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 0.459272
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAAAA CATCTGCTAA GAGCATCAGA CCGGGTGAAC TTAACTTAAA AGAAAAACTC 
GTCCACATTA ATAGAACTGC AAAGGTTGTT AAAGGTGGTA AGCGATTTGG TTTTAACGCA 
ATTGTTGTCG TTGGCGATAA AGAAGGGCAT GTTGGATATG GCCTTGGTAA AGCTAACGAG 
GTACAAGATG CAATAGCCAA AGGTATTGAG GATGGCAAAA AGAATGTCAT TAAAGTTCCT 
ATTGTAAAGG GAACAATTCC GCACCAAATC GTTGTGAAAT ATGGTTCGGC AAAAGTAATG 
ATGAAGCCAG CAACTCCAGG TACTGGTCTT ATTGCTGGTG GAGCAGTTCG TGCTGTGCTT 
GAAATGGCAG GTATTCACGA TATTTTGACA AAGTCTCTTG GTTCATCGAA TCCACACAAC 
GTTGTAAAAG CAGCGATTAA AGGATTACAG TATATTTCAG ATGCTTATGA TGTCGGGGAA 
AGACGTTCAA AAAGCCTCTC AGATGTTTTT GAAAGTTAA 

 

Protein sequence

MAKTSAKSIR PGELNLKEKL VHINRTAKVV KGGKRFGFNA IVVVGDKEGH VGYGLGKANE 
VQDAIAKGIE DGKKNVIKVP IVKGTIPHQI VVKYGSAKVM MKPATPGTGL IAGGAVRAVL 
EMAGIHDILT KSLGSSNPHN VVKAAIKGLQ YISDAYDVGE RRSKSLSDVF ES