| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1825 |
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| Symbol | rpsD |
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| ID | 3746456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 2346512 |
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| End bp | 2347123 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637774363 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_380119 |
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| Protein GI | 78189781 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAGAT TTAGAGGTTC CATAACAAAA GTTTCCCGCA GATTAGGTAT TGCGCTTGCA
CCCAAAGCCG AGAAGTATCT TGAGCGTCGC CCATTTCCTC CAGGACAGCA CGGTCAAGGC
AGAAAAGGTA AAATATCTGA GTACGCTCTT CAGCTTCGTG AAAAACAAAA AATGAAATAC
CTCTACGGTA TTCTTGAAAA GCAGTTCCGT AACTACTATA AAAAAGCCGT TGCTCAACGA
GGTGTTACTG GTGATAACTT GGTAAAGTTG CTTGAGCGTC GTTTAGATAA TATAGTGTTT
CGTGCTGGTT TTTCGCCTTC ACGCGCTGGT GCTCGTCAGC TTGTTTCGCA TGGGCATGTA
ACGGTGAATG GTAAGAAAGT TGATATACCT TCATATTTAG TATCACCTGC TGATGTGATG
GAGTTCCGTC AAAAGAGCAA AAATATGAGT GCTGTTACTG ATTCTTTGAA TAAAACCCCT
GAGTCACGGA TTCCTGCATG GATTCAAGTT GACAAGGCTC ATCAGAAAGC AGTGTTCTTA
AGTGTGCCTG AAAGAGCCGA TATCCAAGAA GAGTTCAACG AGCAGTTAGT TGTTGAGTTG
TACTCTAAGT GA
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| Protein sequence | MARFRGSITK VSRRLGIALA PKAEKYLERR PFPPGQHGQG RKGKISEYAL QLREKQKMKY
LYGILEKQFR NYYKKAVAQR GVTGDNLVKL LERRLDNIVF RAGFSPSRAG ARQLVSHGHV
TVNGKKVDIP SYLVSPADVM EFRQKSKNMS AVTDSLNKTP ESRIPAWIQV DKAHQKAVFL
SVPERADIQE EFNEQLVVEL YSK
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