Gene Cag_1817 details

Gene Information

• Locus tag: Cag_1817
• Symbol: engB
• ID: 3746448
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: -
• Start bp: 2339403
• End bp: 2339987
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637774355
• Product: ribosome biogenesis GTP-binding protein YsxC
• Protein accession: YP_380111
• Protein GI: 78189773
• COG category: [R] General function prediction only
• COG ID: [COG0218] Predicted GTPase
• TIGRFAM ID: [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACATTA CTTCCGCTTC ATTTGTTGCG AGTTATACGT CACTTCATGC TCTGCCAGAA 
GCGGTGCTGC CTGAAATTGT TTTTGCGGGA CGTTCTAACG TGGGGAAATC GTCGCTGCTT 
AATTCATTAA CAGGGTTGAA AGGGCTTGCT AAAACAAGCG CGAAACCGGG TAAAACACGG 
CAGATTAATT ACTTCCTTAT TAACGAACTC TTTTATTTTG TTGATTTGCC CGGCTATGGT 
TATGCAGCCG TTAGCCAAAG CGAAAAAGCG GCATGGGGGC AGTTGCTTGC AAACTATATT 
GAGCGGCGCG ATGCTATTTC GTTAGTTGTG GTGCTGGTGG ATTCACGCCA TCCATTTATG 
GAAAATGATG TGGCTATGCT GGAGTTTTTG GAGTTTCATG GTCGCCCCTA CGGCATTGTG 
ATGACCAAAT CCGATAAGCT GAACCAAAGC GAAAAATCTA AATGCCAGCG AGTTGCCAAA 
ACTTATGCGG CAAAAGCCAA ATTTGTTGTA AATTATTCAT CCTTTTCGGG CGCAGGTAAA 
GCTCTGCTCC TCTCGCATAT TGATCACTCA ATTATCTCTC AATAA 

 

Protein sequence

MNITSASFVA SYTSLHALPE AVLPEIVFAG RSNVGKSSLL NSLTGLKGLA KTSAKPGKTR 
QINYFLINEL FYFVDLPGYG YAAVSQSEKA AWGQLLANYI ERRDAISLVV VLVDSRHPFM 
ENDVAMLEFL EFHGRPYGIV MTKSDKLNQS EKSKCQRVAK TYAAKAKFVV NYSSFSGAGK 
ALLLSHIDHS IISQ