Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1777 |
Symbol | |
ID | 3746638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 2294862 |
End bp | 2295293 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637774315 |
Product | PilT domain-containing protein |
Protein accession | YP_380071 |
Protein GI | 78189733 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.406004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA GATTTTTGCT TGATACCAAT GTGCTCTCTG AATTAATGAA AAACAATCCA GAAAAAAAGG TAATTCAGTG GTTTGATGCA CATCAACATG AAAGATTTTT TACTTCATCA ATAACAAAAG CAGAAATATT GTTAGGTATT GCATTACTTC CCAAAGGTAG GCGACAAAAG CAACTGTATG AAGCAACATT CAAACTCTTT TCTACAACAT TTTTGGAATA TTGTTTTCCA TTTTGTGAGC GTGCCGCTGT AGTTTATTCA GATATTGTAG CACACCAAAA AAGAATTGGT AGAGGTATAT GTACTGAGGA TGCTCAAATT GCAGCAATAG CCTTAACAGA AAATCTTACC TTAGCAACAA GAAACGTGAA AGATTTTCAT TTTATTCAAG GTTTAGAAAT AAGCAATCCA TGGCATGGAT AA
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Protein sequence | MNKRFLLDTN VLSELMKNNP EKKVIQWFDA HQHERFFTSS ITKAEILLGI ALLPKGRRQK QLYEATFKLF STTFLEYCFP FCERAAVVYS DIVAHQKRIG RGICTEDAQI AAIALTENLT LATRNVKDFH FIQGLEISNP WHG
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