Gene Cag_1715 details

Gene Information

• Locus tag: Cag_1715
• Symbol: thrS
• ID: 3746981
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: -
• Start bp: 2227260
• End bp: 2229233
• Gene Length: 1974 bp
• Protein Length: 657 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637774252
• Product: threonyl-tRNA synthetase
• Protein accession: YP_380009
• Protein GI: 78189671
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGATC ATAAAGAATC CACGGGTGCC ATTGCCCTTA CGCTTCCTGA TAGAAGTGTA 
CGCAACGTTG CAATGGGTAG CACGGGTTAC GATGTAGCGC TCTCCATTGG GCGTAAGTTA 
GCGCAAGATG CCCTTGCTAT TAAGCTCAAT GGCGTTGTTT GCGACCTTAA CACCCTTATC 
AATAGCGATG CGGCTATAGA AATTATCACC TTTACTTCGC CTGAGGGTCC TGAGATTTTT 
TGGCATAGTT CCAGCCATTT AATGGCGCAA GCGATTGAGG AGCTTTTTGC GGGAAGTAAG 
TTTGGGGCTG GTCCTGCTAT TGAGCAAGGC TTTTACTACG ATGTTTCTTC GGAGCACCGT 
TTTCGTGAAG AGGATTTACG TGCTATTGAA GCACGTATGT TGGAAATCAG CAAGCGCGAT 
AGTAGTGTGC AGCGGCAGGA GATGAGCCGT GAAGAGGCTA TTGCTTTTTT CACCTCCGTT 
CGTAACGATC CTTATAAAGT TGAAATTCTT ACCGAAACGC TAAAAAATGT AGAGCGCGTT 
TCGCTCTACC ATCAAGGCGA CTTTACCGAC CTTTGTACGG GTCCACATTT GCCTTCTACT 
GGCAAAATAA AGGCGGTGTT GCTAACGAAC ATTTCTGCCT CTTATTGGCG TGGTGATTCG 
AACCGTGAGC AAATGCAGCG TATTTATGGC ATTACTTTCC CTTCGGAAAA GTTGTTGAAA 
GAGCATGTTG CTCGAATTGA GGAGGCAAAG CGGCGCGACC ATCGCAAGCT TGGTGCTGAG 
CTTGAGCTTT TCTTGCTCTC TCCTGAAGTT GGTAGCGGCT TGCCGATGTG GTTGCCTAAA 
GGTGCCATTA TTCGTAGTGA GTTGGAATCT TTTTTGCGCG AGGAGCAGCG TAAACGTGGT 
TACGTGCCTG TTTACACGCC GCATATTGGC AACATTGAGC TATACAAGCG TTCGGGGCAC 
TATCCATATT ACAGCGATTC GCAATTTCCG CCACTTACCT ATCACGATGA AGATGGTAAG 
CAGGAGCAGT ATTTGCTTAA GCCAATGAAC TGCCCGCACC ATCATCTTAT TTATAGCTCT 
AAAATGCGGA GTTACCGCGA TTTACCGCTT CGCTTTACGG AGTTTGGAAC GGTGTATCGC 
CATGAGCAAT CGGGTGAATT AAATGGCTTG GCGCGTGCGC GTGGCTTTAC GCAAGACGAT 
TCGCACATTT ATTGCCGTCC CGATCAGTTG GTGGATGAAA TTTGTAGTGC TATTGAGCTG 
ACGCAATTTG TCTTTAAAAC GCTCGGCTTT GCTGAAGTAC AAACACGCCT TTCGCTGCAC 
GATCCTGCTA ACCAAGCAAA ATATGGTGGT ACGGCTGAAG TGTGGGAGCA GGCGGAAAAG 
GATGTTCAAG AAGCCGCTGA ACGCATGGGG GTTGATTACT TTATTGGCAT TGGTGAAGCA 
AGTTTTTACG GTCCCAAAAT TGACTTTATT GTGCGCGATG CTATTGGGCG CAAATGGCAG 
CTTGGCACCG TGCAGGTTGA CTACGTTATG CCCGAGCGCT TCGATTTAAC TTACGTTGGT 
AGCGATGGGC AAAAGCATCG TCCCGTTGTT ATTCACCGTG CGCCATTCGG CTCAATGGAG 
CGCTTTATTG GTTTGCTTAT TGAGCACACC GCAGGGAACT TCCCGCTCTG GTTGGCACCT 
GTGCAAGTTG CCGTGCTGCC TATTGCTGAA GAAAATCACG ATTATGCAAC CACTGTTTAC 
CGCCGTTTGC TTGCGGCAGG TATTCGTGCT GAACTTGATA CGCGAAGCGA AAAAATTAAT 
CGCAAAATTC GCGATGCTGA AATGAGCAAA ACCCCTTGCA TGTTGGTAAT TGGTCAAAAA 
GAGCAAGCAA ATGGTGAAGT GTCGCTTCGT CGCCATCGTC AAGGTGATGC TGGGCGCTTT 
GCTACCGATG AGCTGATTGA AACGTTGAAG CAAGAGATTG CTAATCGCCA GTAA 

 

Protein sequence

MSDHKESTGA IALTLPDRSV RNVAMGSTGY DVALSIGRKL AQDALAIKLN GVVCDLNTLI 
NSDAAIEIIT FTSPEGPEIF WHSSSHLMAQ AIEELFAGSK FGAGPAIEQG FYYDVSSEHR 
FREEDLRAIE ARMLEISKRD SSVQRQEMSR EEAIAFFTSV RNDPYKVEIL TETLKNVERV 
SLYHQGDFTD LCTGPHLPST GKIKAVLLTN ISASYWRGDS NREQMQRIYG ITFPSEKLLK 
EHVARIEEAK RRDHRKLGAE LELFLLSPEV GSGLPMWLPK GAIIRSELES FLREEQRKRG 
YVPVYTPHIG NIELYKRSGH YPYYSDSQFP PLTYHDEDGK QEQYLLKPMN CPHHHLIYSS 
KMRSYRDLPL RFTEFGTVYR HEQSGELNGL ARARGFTQDD SHIYCRPDQL VDEICSAIEL 
TQFVFKTLGF AEVQTRLSLH DPANQAKYGG TAEVWEQAEK DVQEAAERMG VDYFIGIGEA 
SFYGPKIDFI VRDAIGRKWQ LGTVQVDYVM PERFDLTYVG SDGQKHRPVV IHRAPFGSME 
RFIGLLIEHT AGNFPLWLAP VQVAVLPIAE ENHDYATTVY RRLLAAGIRA ELDTRSEKIN 
RKIRDAEMSK TPCMLVIGQK EQANGEVSLR RHRQGDAGRF ATDELIETLK QEIANRQ