Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1639 |
Symbol | |
ID | 3747946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 2137154 |
End bp | 2137978 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637774177 |
Product | short chain dehydrogenase/reductase family oxidoreductase |
Protein accession | YP_379934 |
Protein GI | 78189596 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCACGC TGCATCAAAA AGTTGCAATT ATTACTGGTT CTACTCGAGG CATTGGCAAA GCTATAGCAC AAGAATTTGT GCGGCAGGGT GCCCGTGTGG TTATTACCTC ATCCTCTCCT CAAAATGTTG AAGCTGCGTG TAAGGAATTT CCTGCTGGCA GCGTTCATGG CATTGCGTGC AATGTAACGT CGCCTGCTGA TATGGAACGG CTTGTACGCG AAAGTGTAGC TCATTTTGGA CAGCTTGATT GCTTTATTAA CAATGCCGGC ATTTCCGATC CCTTCACCAA CATTACCGAA AGCGATCCCG AAGCGTGGGG TCGCGTGATT GATACCAATC TCAAAGGCAC CTATAACGGC TGCCGTGCGG CTCTTATCTA TTTTCTTACC AACAACAAGC AAGGCAAAAT TATTAACATG GCTGGCTCTG GCACCGATAA GGGGTCAAAT ACGCCATGGA TTAGCGCTTA CGGTTCCACG AAAGCGGCTA TTGCTCGCTT TACCTACGCT ATTGCGGCAG AATATCGCCA CACCAACATC TCCATTATGC TGCTGCATCC AGGTTTAGTG CGCACCGGCA TGGTAAGCAC CGAGCATCCA ACGCCTGAGT TGGAACGGCA GTTACGCACC TTTAACACCA TTCTTGATAT TTTTGCCCAA CCACCAACGG TTGCCGCTTC ATTAGCGGTA AAAATGGCAT CGCCATGGAG CGATGGCAAA AATGGCATCT ATCTTTCGGC ATTAAGCTCC CTCCGCAAAA AAAAATTGCT CATAAGCTAT CCCTTCCGTA AACTCTTTAA GAAGATAGAT CGCCAAACTT ATTAA
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Protein sequence | MLTLHQKVAI ITGSTRGIGK AIAQEFVRQG ARVVITSSSP QNVEAACKEF PAGSVHGIAC NVTSPADMER LVRESVAHFG QLDCFINNAG ISDPFTNITE SDPEAWGRVI DTNLKGTYNG CRAALIYFLT NNKQGKIINM AGSGTDKGSN TPWISAYGST KAAIARFTYA IAAEYRHTNI SIMLLHPGLV RTGMVSTEHP TPELERQLRT FNTILDIFAQ PPTVAASLAV KMASPWSDGK NGIYLSALSS LRKKKLLISY PFRKLFKKID RQTY
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