| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1635 |
|---|
| Symbol | |
|---|
| ID | 3747943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 2133965 |
|---|
| End bp | 2135065 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637774174 |
|---|
| Product | alanine racemase region |
|---|
| Protein accession | YP_379931 |
|---|
| Protein GI | 78189593 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0787] Alanine racemase |
|---|
| TIGRFAM ID | [TIGR00492] alanine racemase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGAAG CGCTCATTTC GCTTGAACAT CTTCGAGGCA ATGTGCGTGC CTTGCAAGCG
CATCTTAACG GCAGAGCGCA CATAATGGGC ATTGTAAAAG CAAACGCCTA TGGGCACAAC
GTTCATTTTG TAGCTTCCAC GTTGGAAACG TGCGGCATCC ACAATTTTGG AGTGGCAAAC
ATTCACGAAG CGCTGGAACT CAAGCAAGGT GGCGCACTCC AAAAGCCCGC AACAATTATA
GCCTTTGCCT CGCCCCTCCC ATCACATCTC CCTTACTTTA TAGAACATGG TATTACCATG
ACACTTTGCG ACCACGCCAC CTTTGTTGCC GCACGCGACA TTGCAGCAGC GCTTGAACGT
CCGTTGCAAG TACACGTTAA AATTGATAGC GGCATGGGGC GACTTGGCGT TGCCCCCCAT
GAAGCAATGG CACTATTGCA AGCCGTTGAT GCCTCGCCAT TTTTGGAACT CACGGGCGTT
TATACCCATT TTGCCGATAG CGCTACACCA AATAGTTTTA CCCACCAGCA ACTTGCCATT
TTTAAAACCA TTGCCGCCGA ATACGAGCAT GCAGCCCAAC GCACTATTTG CAAACATACC
GCAAACAGTG GAGCACTGCT TTCGCTGCAA GCATCGTGGT GCGACATGGT GCGCCCGGGA
ATTTTGCTCT ACGGCTACCA TCCTTCGCAA GAGTGCCCCA CTCAACTAAA CGTGCAGCCT
GTTATGCAGG TGCAAGCAAA GGTGATGTTT ATAAAAAAAG TAGCCGCTGG AACCTCCATT
AGCTACAATC GAACATGGCA GGCACCAACA GAGCGCTTTA TTGCCACCAT TGCTGCGGGA
TATGCCGATG GCTACCATCG CTTATTATCC AACAACGCCG CAGTGCTTAT TAACGGCAAA
CGCTACCCAC AAGTTGGCAC GGTTACCATG GATCAAATTA TGGTTGACCT TGGCTCATCG
CATTCGGTGC AAGTGGGCGA TAGTGCCGTA CTGTTTGGCT GGGATACTCT TTCGGCTAAC
GAGTTGGCAG CACAAGCGCA CACCATTAGC TACGAAATGC TTTGCGCAGT CTCTGCTCGA
GTTAAGCGTC GGGTAGTGTG A
|
|---|
| Protein sequence | MCEALISLEH LRGNVRALQA HLNGRAHIMG IVKANAYGHN VHFVASTLET CGIHNFGVAN
IHEALELKQG GALQKPATII AFASPLPSHL PYFIEHGITM TLCDHATFVA ARDIAAALER
PLQVHVKIDS GMGRLGVAPH EAMALLQAVD ASPFLELTGV YTHFADSATP NSFTHQQLAI
FKTIAAEYEH AAQRTICKHT ANSGALLSLQ ASWCDMVRPG ILLYGYHPSQ ECPTQLNVQP
VMQVQAKVMF IKKVAAGTSI SYNRTWQAPT ERFIATIAAG YADGYHRLLS NNAAVLINGK
RYPQVGTVTM DQIMVDLGSS HSVQVGDSAV LFGWDTLSAN ELAAQAHTIS YEMLCAVSAR
VKRRVV
|
|---|
| |