| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1628 |
|---|
| Symbol | |
|---|
| ID | 3747936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 2126357 |
|---|
| End bp | 2127436 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637774167 |
|---|
| Product | C-5 cytosine-specific DNA methylase |
|---|
| Protein accession | YP_379924 |
|---|
| Protein GI | 78189586 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0270] Site-specific DNA methylase |
|---|
| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGC AAAATAACAT ATCAGCTATT GACTTATTCT GCGGAATTGG TGGTCTTACC
TATGGCTTAA AAAAGTCAGG AATACAAGTA AAAGCAGGAA TAGACATTGA TGAATCTTGT
CGATACAGTT TTGAAGAGAA TTGCGGCACA AAATTTATAA ATAAAGATAT TCAAAAATTA
CAAAAAGAAG AATTAAATTC TATTTATGGT AATGCTGAAA TAAAAATATT AGTTGGTTGT
GCCCCTTGTC AACCATTTTC ATCTTATACA TATAAAAAAG ATAAAAACAA AGATAAAAAA
TGGCAATTGT TATATGATTT TTCTCGACTA ATTAAAGAAA CAAAGCCAGC AATTATATCT
ATGGAGAATG TTCCTACTTT ATTAAATTTT AAAAAAGCCC CCGTTTTTTA TGATTTTATT
CAGGAATTAA CAGCTAATAG TTATAAGGTT TGGTTCAATA TAGTTTACTC GCCTGATTAT
GGCATTCCTC AAAAAAGAAG AAGATTAGTT TTATTAGCTT CAAAATTGGG AGACATAGAA
CTTCTCCCAC CAACACATAA TCCTGATAAC TATATAACAG TAAAAGATGC TATTGGAAAT
CTCGAAGCAA TCAAATCAGG AGAAACGTCA CAAAATGATT TTATTCATAA GGCTGCCCAA
CTCTCTGAAA TAAACCTTTC AAGGATTAAA CAATCAATAC CAGGCGGAAG TTGGAAAAAG
GACTGGGACG ATGAGTTGAA GTTGGTTTGC CATACCAAAG AAAAAGGAAA AACCTACGTA
AGTGTTTATG GACGAATGAT GTGGAACGAA CCATCACCAA CAATGACCAC TTTTTGCACC
GGCATCGGAA ATGGCAGGTT CGGGCATCCT GAACAAAATA GAGCAATTTC TTTAAGAGAA
GCAGCGATAT TACAAAGTTT TCCTGCAGAT TATAAATTTG CAGAAAATGA AGCGACTTTA
AAATTTGGTA AAACTTCAAA ACATATTGGA AATGCTGTTC CTCCAAAACT TGGCGAGATA
ATAGGTAAAA GCATTTTACA ACATTTAGAA AAATACAACT ATGGAAAAGA AAATAAGTAA
|
|---|
| Protein sequence | MKMQNNISAI DLFCGIGGLT YGLKKSGIQV KAGIDIDESC RYSFEENCGT KFINKDIQKL
QKEELNSIYG NAEIKILVGC APCQPFSSYT YKKDKNKDKK WQLLYDFSRL IKETKPAIIS
MENVPTLLNF KKAPVFYDFI QELTANSYKV WFNIVYSPDY GIPQKRRRLV LLASKLGDIE
LLPPTHNPDN YITVKDAIGN LEAIKSGETS QNDFIHKAAQ LSEINLSRIK QSIPGGSWKK
DWDDELKLVC HTKEKGKTYV SVYGRMMWNE PSPTMTTFCT GIGNGRFGHP EQNRAISLRE
AAILQSFPAD YKFAENEATL KFGKTSKHIG NAVPPKLGEI IGKSILQHLE KYNYGKENK
|
|---|
| |