| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1565 |
|---|
| Symbol | |
|---|
| ID | 3747122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 2051896 |
|---|
| End bp | 2052870 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637774105 |
|---|
| Product | Sua5/YciO/YrdC/YwlC |
|---|
| Protein accession | YP_379863 |
|---|
| Protein GI | 78189525 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0009] Putative translation factor (SUA5) |
|---|
| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTAA CACTTCCCTT TCTCATGCAC ACCTTACTTA CCGACTCCCC TGCTGAAGCT
GCTGCACTGC TCAATGGTGG TAAAATTGTA GCTTTCCCCA CCGAAACAGT GTATGGGCTT
GGGGCAACCA TCAACCACTC GGAGGCGCTC AAGCAAATAT TTGTGGCTAA AGGACGCCCT
TCCGATAATC CGCTTATTCT CCATATTGCT CATCCCGATA ACATTGGCAA AGTTGCTGCC
ACCGTGCCAC GCTACGCGGA ACGGTTCATT GAGAAATTTT TTCCCGGTCC ACTCACCTTA
GTGCTACCAA AACAGCCACA GGTGCCTGAG CTTGTAACTG CTGGTTTGCA AAGTGTGGGC
GTGCGTTGCC CAGCGCATCC AATGGCGCAA GCACTGTTAG CATTAGTAAA TTCGCCCGTT
GCAGCCCCCT CAGCAAATCG CTCAGGTAAG CCAAGTGCTA CAAGTTGGGA AACGGTATAT
GACGATCTGA ATGGGCGCAT TGATGGATTG CTGAGAAGTG CGCCATGCAC TATTGGGCTG
GAATCAACTA TTGTAGATTG TACGGCTAAC ACGCCGCTGC TTTTACGAGC AGGCGCAATT
ACGTTGGAAC AATTACAAGC GGTGGTGCCC TCTTTACGGG TGAATCAACC CACACACAAC
AACGAACCCC CAAAAAGTCC TGGGCTAAAG TATCCACACT ATGCGCCACA CGCTACCATT
GAGTTGCTTG CGGTAGGCGC TGTACCGCTA ACACTTCCAC CCAACAGCGC TTATATTGGC
ATAGCACCTC CGCCCAACGG CGCAACACTT GTAATGCAGT GCGCCTCAAT AGAAGCGTAT
GGCAATGCAC TCTTTCAATT TTTCCGCACA TGCGACGCAC ACGCCATTCG CACCATTTAT
TGCGAATTAC CTACAAGCGA TGGACTTGGA CGCGCCATTG GCGATCGTTT ATTGCGAGCG
GCAGGAAGAA TGTAA
|
|---|
| Protein sequence | MAVTLPFLMH TLLTDSPAEA AALLNGGKIV AFPTETVYGL GATINHSEAL KQIFVAKGRP
SDNPLILHIA HPDNIGKVAA TVPRYAERFI EKFFPGPLTL VLPKQPQVPE LVTAGLQSVG
VRCPAHPMAQ ALLALVNSPV AAPSANRSGK PSATSWETVY DDLNGRIDGL LRSAPCTIGL
ESTIVDCTAN TPLLLRAGAI TLEQLQAVVP SLRVNQPTHN NEPPKSPGLK YPHYAPHATI
ELLAVGAVPL TLPPNSAYIG IAPPPNGATL VMQCASIEAY GNALFQFFRT CDAHAIRTIY
CELPTSDGLG RAIGDRLLRA AGRM
|
|---|
| |