| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1551 |
|---|
| Symbol | |
|---|
| ID | 3746551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 2033723 |
|---|
| End bp | 2033995 |
|---|
| Gene Length | 273 bp |
|---|
| Protein Length | 90 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637774091 |
|---|
| Product | RNA recognition motif-containing protein |
|---|
| Protein accession | YP_379849 |
|---|
| Protein GI | 78189511 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000000189829 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTT ACATTGGCAA TCTGGCTTAC AGCGTTACTG AAAATGACCT GCGTGACGCA
TTCGGTCAAT TTGGACAGGT AGAAAGCGCA AGTATTATTA CCGACAAATT TTCAGGGCGC
TCTAAGGGCT TTGGTTTTGT GGACATGCCA AACGATAGTG AAGCTCGCGA AGCAATCGGA
GCAATGAATG AAAAAGAACT CAATGGTCGC CCAATAAAGG TAAACGAGGC AAAACCTCGT
GAGGAGAGAC CAGCAAGAAG AGATCGTTAC TAA
|
|---|
| Protein sequence | MNIYIGNLAY SVTENDLRDA FGQFGQVESA SIITDKFSGR SKGFGFVDMP NDSEAREAIG
AMNEKELNGR PIKVNEAKPR EERPARRDRY
|
|---|
| |