Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1550 |
Symbol | |
ID | 3746550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 2031558 |
End bp | 2033306 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637774090 |
Product | glutathione-regulated potassium-efflux system protein KefC, putative |
Protein accession | YP_379848 |
Protein GI | 78189510 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00125081 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACGACT TCTCGTTTCT TGGTGAGTTA GTATTAATTG GCGCTGCTGC CATAGCAATT ATTCTGATTT TTCAGCGGCT CAAAATCCCG TCAGTTATCG GGTTAATTTT TACTGGCATT CTTATTGGAC CCTCAGGCAT TGGTGCGGTT TATGATCAAA AAATGATTTC CACATTAGCT GAGCTTGGTG TGGTGCTGTT GCTTTTTACC ATTGGGCTTG AGTTTTCGCT TGAGGAGTTA AAAAAGCTGA GGAAGGTGGT GTTGGTTGGT GGTGTGGCAC AAATTATTGC CACAACCTTG GTTATTAGTG CCCTTGCCTC TTGGCTTATG CCCATAATGG GGGAGCCAAT TAGTGTGCCA ACGGCGTTTT TTCTTGGTTC TACTTTTTCG GTAAGTAGTA CGGCAATTTG TTTAAAAATT TTAGCGGAGC GTGAAGAGCT GTCGCTGCCG TATGGGCGCA TTGCACTTGG CATTTTAATT TTTCAAGATC TTGCCATTGT GCCATTAATG TTGGGCATTA ACATGATTGC GCCCGGTGCC TCCTCTTCGT TTTATGCTAT GATGAAGGAA ATTGGCTTGG TGATTGTGTT GGCAGTTGCC ATTGTGCTTG GTTTTCGTTT ACTGATGCCC AAACTTGTGC GCTTTATTGT TTCCCTTAAG GCGCGCGAAG TGTTGGTACT TGGTGCGCTT GTTATTTGCT TTGGAGCGGC TTACCTCACC TCATTGGCAG GGCTTTCGTT AGCGCTTGGC TCTTTTGTGG CTGGTATGGT GATTGCAAGT ACCGATGAGA GTCATCAAAT TAGTGTGATT ATTGATCCAT TTCGCGAAGC CTTTAGCAGC CTCTTTTTTA TTTCGGTGGG ATTGTTGCTG GATGTAAACA TGGAGAATCT GCCGCTTTTT ATAGCCATTG CCGTTGTTGT GTTGTTGGTG AAAGGGTTGG TGGTGGCTGG TATTGGGCTG TTTCTTGGCA ATTCGCTTCG TGTAAGCATG ATGGCTGGTA TGGCGCTTGC TCAAATTGGA GAATTCTCTT TTGTCTTAGC CGAAACAGGC TTACACAATG GGCTTATTAG TCGCGATATT TTTCAAGCCA TGTTGGTCAT TATTGTGGTA ACCATGATTG TTACCCCAGC AATGATTGCC GTTGCACCAA AAGTTGCCGA TCAAGTGGTG CCTGCTTTTG GCTTTATTCC ACTTGTAGGG CGCTATACCG CTCCACCAGC ACCAACGCAA GCCGTTCGTC CACCCAACAG CGCTATTATT TGTGCGGGCG AGATTCATGC GGCAATTATT GGCTTTGGGG TGAATGGGCA AAATGTGGCA GCCGTACTTC ATGCAACCAA CATCTCCTAT TCAGCGCTTG AAATAGATCG TTACATTGTA AAAACCATGC GCCGTAAAGG CGAGCCAATT TTTTATGGCG ATTGCACCGA AAAAAAGTCG CTTTTGCGAG CTGGTATTGA CCATGCACGA GCGGTGGTGA TTGGTATTTC TGATCATACG GCTATTAGCA AAAGTATTGC GTTAATCCGT GAGTTAAATG AGAAAGCCTA CATTGTTGTA CGAGCACGAA CGTTAGACAC GGTGGGTGAT TTTTACCGTG CAGGTGCTGA TGTGGTGGTT ACTGAAAAAT TTGAAACCTC CATCCAAATT TTTTCTCAGT TGCTAAACCA TTTTACCGTT GCCCCCGATC TTATTTTAGA GCAGCAAGAA ATTATTCGCC GTGAGTGCGA AAAGATTTTT TTAAAGTAG
|
Protein sequence | MHDFSFLGEL VLIGAAAIAI ILIFQRLKIP SVIGLIFTGI LIGPSGIGAV YDQKMISTLA ELGVVLLLFT IGLEFSLEEL KKLRKVVLVG GVAQIIATTL VISALASWLM PIMGEPISVP TAFFLGSTFS VSSTAICLKI LAEREELSLP YGRIALGILI FQDLAIVPLM LGINMIAPGA SSSFYAMMKE IGLVIVLAVA IVLGFRLLMP KLVRFIVSLK AREVLVLGAL VICFGAAYLT SLAGLSLALG SFVAGMVIAS TDESHQISVI IDPFREAFSS LFFISVGLLL DVNMENLPLF IAIAVVVLLV KGLVVAGIGL FLGNSLRVSM MAGMALAQIG EFSFVLAETG LHNGLISRDI FQAMLVIIVV TMIVTPAMIA VAPKVADQVV PAFGFIPLVG RYTAPPAPTQ AVRPPNSAII CAGEIHAAII GFGVNGQNVA AVLHATNISY SALEIDRYIV KTMRRKGEPI FYGDCTEKKS LLRAGIDHAR AVVIGISDHT AISKSIALIR ELNEKAYIVV RARTLDTVGD FYRAGADVVV TEKFETSIQI FSQLLNHFTV APDLILEQQE IIRRECEKIF LK
|
| |