| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1424 |
|---|
| Symbol | |
|---|
| ID | 3746317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 1893393 |
|---|
| End bp | 1894439 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637773960 |
|---|
| Product | negative regulator of class I heat shock protein |
|---|
| Protein accession | YP_379725 |
|---|
| Protein GI | 78189387 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
|---|
| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTATC GTGAACTAAC AGCAAGAGAA CGCCAAATAC TGGGGATTAT TATTCAATCC
TACGTAGTAA GCGCTGCACC TGTTGGCTCT AAATATATTG CCCGCCATTA CAATCTTGGG
CTTTCCGACG CTACCATTCG CAATGTTATG GCAGAGCTTG AGGAGCTTGG TTTTATTAGC
CAACCGCACA CTTCCGCCGG ACGAGTGCCA ACCGATAAGG GTTACCGTTA TTATGTTGAT
TTGATTATGA CGGTTAAAAC GCTTGATGAA CAGGAAAAGC AACGATTTGA GCAACATATT
ACACCGCTTG AGCGCAAAGG TACTTCGGCT GATGTATTGC TTTCAGCCGT AAAGGTGCTC
GGCACTATTT CGCGCCAACT AAGCGTTGTG CTTTCGCCAA CATTATCGAA TGCACTTTTT
GAAAAGCTTG ATATGGTGCT ACTGAGTTCA ACCCGCATGA TGGTTATTAT CTCAATTCAA
TCGCTTTTTG TAAAGACGAT TGTAATGGAG TTACACATGC AGGTGTCGCG CCAAATGTTG
GATGAAGTGG TTGATGTACT GAATGAGCGA TTATCGGGGC TAACGCTTTC TGAAATTCGT
CGCTCTATTA ATCAGCGCCT TGCCGATTGT TCGTGCGATA ATGAGTTGAA AAACCTTATT
GTACGTTCGG CGGGAACTCT TTTTGATGAA ATGCCCGTTT TTGAAAGGCT TTACATTTCG
GGCACTGAAT ATTTGGTAGA ACAACCCGAG TTTCAACAGC CTGAAAAGGT GCGCGATCTC
ATTACTATGC TCGAAGATAA ATTTAGTGTT GCAACCTTAG TGGAGCAACA TCATGCCAAC
AACCCCGATG TAACTATCAC CATTGGCAAA GAGCATGGTA AGCGGCAGGC GGAGGATTTA
ACCGTTCTTT CTGCCCCATA TTATGTGGGC GATATGGTAG GAACGGTTGG CATTCTTGGA
CCAAAGCGCA TGGATTATGA ACATGCCGTG CGCATTTTGC ACTACATGGC AGGAAGTTTA
TCCTCCACCT TATCAATTCA GAACTAA
|
|---|
| Protein sequence | MDYRELTARE RQILGIIIQS YVVSAAPVGS KYIARHYNLG LSDATIRNVM AELEELGFIS
QPHTSAGRVP TDKGYRYYVD LIMTVKTLDE QEKQRFEQHI TPLERKGTSA DVLLSAVKVL
GTISRQLSVV LSPTLSNALF EKLDMVLLSS TRMMVIISIQ SLFVKTIVME LHMQVSRQML
DEVVDVLNER LSGLTLSEIR RSINQRLADC SCDNELKNLI VRSAGTLFDE MPVFERLYIS
GTEYLVEQPE FQQPEKVRDL ITMLEDKFSV ATLVEQHHAN NPDVTITIGK EHGKRQAEDL
TVLSAPYYVG DMVGTVGILG PKRMDYEHAV RILHYMAGSL SSTLSIQN
|
|---|
| |