Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1400 |
Symbol | |
ID | 3747159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 1863568 |
End bp | 1865463 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637773936 |
Product | chloride channel, putative |
Protein accession | YP_379701 |
Protein GI | 78189363 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTT TATCTCATAA AAAAGGACGT TTAGCGCGAA GAATTATTGC CTTCTTTTAT ATTCTTTTTA GAAGAAGTAG ATACTTTAAA GGAAGTTCTC AAAATTTTAT AAAATTAACA TTAGAGTATA TTTTGGTTCA ATTGAATTTG AATCAAGATA TACCATTTCT TTTTGTTGCC GTAATTGTTG GTCTTGTTAC TGGTTATGTA GCTGTTTTAT TTCACGAAGC CATTAAAGCA ATCAGTAATT TTAGCTTTAA TGATTTACGT TTGCTTGGCG ATATATCTTT TATTGAACAA TATTGGGTCT TTTTTTTACC GTTTATTCCA GCAATTGGAG GGCTGTTTGT TGGCTTATAT AATACGTTTA TTATTAAAAA ATCTTCCCGA CATGCACTTG CTTCAGTAAT TAAATCTGTT GCTCACAATG ATGGTATTAT AGATAGAAAA TTATGGTTTC ATAAAACCAT TACTTCCGTT GTTTGCATTG GTACAGGCGG AGGCGGAGGG AGAGAAGCAC CAATTGTACA AGTTGGCTCA GCTATAGGTT CTACTATAGC TCAATGGCTA CGATTTTCTC CCGAAAAAAC ACGAACGTTG CTTGGTTGTG GGGCAGCCGC AGGGCTTGCC GCAGTATTTA ATGCACCAAT TGGTGCTGTC ATGTTTGCTA TTGAGGTGCT GCTTGGCGAT TTTAGTGTAA AAACGTTTAG TCCAATTGTT ATAGCGGCTG TTATTGGCAC AGTTCTTTCA AGAAGTTTTT TAGGCAATAG GCCAACATTT GATGTGCCTG ATTATACATT AGTTTCAAAT ATTGAGTTGC TTTTTTATTG TGTGCTTGGG GTGCTTGCAG GGTTATCAGC AGTTATGTTT ATAAAAACAT ATTTTGCTAT TGAAGAATGG TTTGATAAAC TTCAAATTCG TCGCAATCTT CCAGTTTGGA TAATGCCTGC AATTGGAGGT TTTTTAAGTG GTATTATTTG TATTTGGTTA CCTGGATTAT ATGGATTTTC GTATAACGTT ATTAGTAATG CTGTTTATGG AAACGAAACA TGGTATAACC TTATAGGTAT TTATTTGCTT AAGCCGGTTG TTGCGGGATT AAGTATTGGT TCGGGTGGTG CTGGTGGAAT GTTTGCACCT GCAATGAAAA TGGGGGCTAT GTTAGGTGGT ATGTTTGGAA TTGTTGTTCA CCAATTTTTT CCGCTCATAA CAGCTACATC AGGGGCATAC GCTCTTGTAG GTATGGGAGC TTTAACCGCA GGTGTTATGA GGGCACCCTT AACAGTTATT CTTATACTTT TTGAAATTAC TGGGCAATAT GAAATTGTAT TGCCAATTAT GTTTGCGGCT GTTACCTCTG CCGTAGTTGC ACGTCTTGCA TATCGTCATT CTATGGAAAC CTACGTGCTT GAAAAACAAG GCATAAAAGT TGGTTTTGGT ATTGCGTTAT CTGTAGCAGA ACAAGTAGTT GTTTCGGATA TTCTTGATAA AAAACGCACT CAATTTGTTA GCACCACACC AATGAAAAAG ATTTTGGAGG TTTTTTATAG CACTCCCGAA ACTAACTTTC TTATTGTGGA TAAGCAAGGT GTTTTTATTG GTAACATTAG TTTAGATGAT ATCCGAATTT TGCTTAAAAA TGGTTGTAAT GATGATTTAA TAGCCGATGA TATTGTTAAT AAAAATGTTC CTGTTCTTTA TACCAATTCA CGGCTTGATG AGGCATTAAA ATTATTTGAG CTTTCTGATT ACGATATATT GCCTGTACTT GATACAAAAA ATAATATTTT GCAAGGTGTG CTTCGTCAAG AAAAAGCATT TGCAAGTTAT CGTAAACAGC TTAATCTTTA TGGATCAGAT TATTCTGATA AATCAGTACA TCAAGGGGTT AAATAA
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Protein sequence | MNILSHKKGR LARRIIAFFY ILFRRSRYFK GSSQNFIKLT LEYILVQLNL NQDIPFLFVA VIVGLVTGYV AVLFHEAIKA ISNFSFNDLR LLGDISFIEQ YWVFFLPFIP AIGGLFVGLY NTFIIKKSSR HALASVIKSV AHNDGIIDRK LWFHKTITSV VCIGTGGGGG REAPIVQVGS AIGSTIAQWL RFSPEKTRTL LGCGAAAGLA AVFNAPIGAV MFAIEVLLGD FSVKTFSPIV IAAVIGTVLS RSFLGNRPTF DVPDYTLVSN IELLFYCVLG VLAGLSAVMF IKTYFAIEEW FDKLQIRRNL PVWIMPAIGG FLSGIICIWL PGLYGFSYNV ISNAVYGNET WYNLIGIYLL KPVVAGLSIG SGGAGGMFAP AMKMGAMLGG MFGIVVHQFF PLITATSGAY ALVGMGALTA GVMRAPLTVI LILFEITGQY EIVLPIMFAA VTSAVVARLA YRHSMETYVL EKQGIKVGFG IALSVAEQVV VSDILDKKRT QFVSTTPMKK ILEVFYSTPE TNFLIVDKQG VFIGNISLDD IRILLKNGCN DDLIADDIVN KNVPVLYTNS RLDEALKLFE LSDYDILPVL DTKNNILQGV LRQEKAFASY RKQLNLYGSD YSDKSVHQGV K
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