| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1379 |
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| Symbol | |
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| ID | 3747640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 1842366 |
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| End bp | 1844036 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637773915 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_379680 |
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| Protein GI | 78189342 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGTGGC TGCCCACAGC ACTGCCGCTT GAGGCTGCTG AGCCTGCTCG CAATAACCCC
AATGCGTTGC GGCGCTCCTC TATTTCGGAT GTTCTCGATA GCCTTGTAAA CGCTACCTAT
TTTAAGGATG AGTACTTTAC CGCACCGTCG CGTGAAGGTG GCGTAAGTTT TCCATCAACC
TTTGTGCCTC AATTTAGCGA TTCCGTTTAT AGCTCACGTA TTGCGGCACT TCGGCGCAAA
ACACCCATGC CACTTGTTTA TAACGCTCAA GTGAAAGGGT ACATTCGCAT GTATGCCGTT
GAAAAGCGTA GCTATACCGC TAAAATTTTA GGTTTAACAA AAATTTATTT TCCTCTCTTT
GAAGAGAAGT TTGATACCTA CAATGTGCCG CTTGAAATGA AATACTTGGC GATTGTGGAA
TCGGCACTGA ATCCCACAGC CGTCTCGCCA GCAGGTGCAA AAGGGTTGTG GCAGTTTATG
TATGGCACGG GTAAAATGTA TGGCTTGGAG TCCTCCTCGT TTATTGAAGA TCGTTACGAT
CCTTATAAAT CAAGCGTTGC AGCGGCTCGC CATTTGCGCG ATTTATATCA AATTTATGGT
GATTGGTTTT TAGCCCTTGC CGCTTACAAT GCTGGTCCTG GTAACGTTAA TAAAGCAATT
CGTCGCGCTG GTGGTGTAAA AGATTATTGG GCAATTTGGG ACTATCTGCC AGCCGAAACA
CGAGGCTACG TGCCTGCCTT TATAGCAGTT CACTACATTA TGAGCTACCA TAATGAGCAC
AACATTCGTC CGCTTGAACC AGCCTATCTC TATCGCGATA TTGATACGTT GCGTACCTCA
CGCATGGTTA CCTTTGAGCA AATCAGCGAA ACGCTTGGTA TTTCAGCCTC CGATTTAGAG
TTCCTTAATC CGCAATACAA AATTGGAGTG ATTCCTGCCT CTACGGGCAA TGGTAACGTT
ATTCGGTTGC CTCGTCGGTA TGTAGCCCAA TTTCAACGCC GCGAACAAGA AATTTATGCT
TATCGCTCCG CTCGCACTAT GGAGCGTGAA GCGCTCTATG CTCGGCTTGA AAGTGTGCGA
GCTGGTGCAG GTGAGCAAAG TAGTGAAAGC AGTAAAGGCA TGGGGAACCA GAAAATTCAC
ATTGTACAGC GAGGTGAAAC GCTTGGCTCG GTTGCACGCT TGTATCGCAC CTACATTAGC
CAGCTTATTG CATGGAATAA TCTTGTAGAT GCTGATATTA TGGTTGGGCA ACGCTTAGTA
GTGTTTGGTG GCGAGGATAA TAGTCCAGTT GCTGCACCTG AGCCACCAAA AAGCACTGTT
CCACCGAAGG CTCCCCCTAT AGAGCGTCAA CCAACGGCAG CACCAGAAGT GCGTGCAGCG
GCTCCCCCCA AACGCATTGC TGTAACACGT TCAACCCAAA CGGTTACTCG CGATGAGTTG
GTAGCACTTA CTGAAACACC AACCGTGGCT ACCGATAACA CAAGCGCAAA GGCTGAGCCA
ATATTCCATG TAGTAGAGCC AGGGCAAACG CTGTTTGCAA TTGCTACACA ACGCAAGGTA
ACGGTGAATC AGCTCATGCT TTGGAACAAT CTTAAAAGTG TTCAGATTAA AGCAGGGCAA
AAGCTCATTG TTTCAAGCGA TGGGCAAAGT GGGCGCGATA ACAGTCAATA G
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| Protein sequence | MLWLPTALPL EAAEPARNNP NALRRSSISD VLDSLVNATY FKDEYFTAPS REGGVSFPST
FVPQFSDSVY SSRIAALRRK TPMPLVYNAQ VKGYIRMYAV EKRSYTAKIL GLTKIYFPLF
EEKFDTYNVP LEMKYLAIVE SALNPTAVSP AGAKGLWQFM YGTGKMYGLE SSSFIEDRYD
PYKSSVAAAR HLRDLYQIYG DWFLALAAYN AGPGNVNKAI RRAGGVKDYW AIWDYLPAET
RGYVPAFIAV HYIMSYHNEH NIRPLEPAYL YRDIDTLRTS RMVTFEQISE TLGISASDLE
FLNPQYKIGV IPASTGNGNV IRLPRRYVAQ FQRREQEIYA YRSARTMERE ALYARLESVR
AGAGEQSSES SKGMGNQKIH IVQRGETLGS VARLYRTYIS QLIAWNNLVD ADIMVGQRLV
VFGGEDNSPV AAPEPPKSTV PPKAPPIERQ PTAAPEVRAA APPKRIAVTR STQTVTRDEL
VALTETPTVA TDNTSAKAEP IFHVVEPGQT LFAIATQRKV TVNQLMLWNN LKSVQIKAGQ
KLIVSSDGQS GRDNSQ
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