| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1345 |
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| Symbol | |
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| ID | 3746860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 1813138 |
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| End bp | 1814001 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637773883 |
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| Product | quinate/shikimate 5-dehydrogenase |
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| Protein accession | YP_379648 |
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| Protein GI | 78189310 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.786263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGCT CAACTCGTAT TTTTGCCTTG CTTGGTCGAG CGGTGGATTA CTCGTATTCA
CCGCTTATTC ACAACACGGC GTTTCAAGCG CTGGGGTTGC CTTATCACTA CACCATTTTT
AATATTGCTG AAGCCGCACT TGTTGGGGAT GCCCTGCGTG GAGCACGGGC ACTTGGGTTG
GGCGGCTTTA GCGTTACCAT TCCCTACAAG CAAACCGTTG TTCCTTTTTT AGATGAGCTT
TCAGAAGAGG CAACAACCAT TCAAGCTGTT AACTGTATTG TTAATAAGAA CGGTAAGCTA
ATTGGCTACA ACACCGATAT TCTTGGTTTT GCCTCTCCTT TGTTTGCTTA TCGCGAAGCG
TTGCATGGCG CTACCATTGC GCTATTTGGC AGTGGTGGTG CAGCACTTGC GGCAATTGAG
GCGTTCCAGC GCTACTTTAC CCCTAAGCAA GTGTTGCTTT TTGCACGCGA CAGCCAAAAA
GCTAAAAGCC AACTTCGTAG CTCGTTGGCA CTTGAACGTT ATACCAACCT TGCCATTGTA
CCACTTTCGG ATTACGAGCG CGTGCGTGAG TGCCGTTTGG TGATTAATGC CACCCCATTA
GGCACCAAAG GGCGAGCTGA CGGGAGCGCC ATTATTCCCC TTGAGAGTAA CTTGCTGCAT
AGTGAGCACA TTGTGTATGA TATGGTTTAT AATCCAACCA TAACGCCCTT GTTGCAAGCG
GCACAAGCGG TTGGTGCCTC CACCATTTTT GGTATTGAAA TGCTGATTGG GCAAGCAGAG
CAAGCCTTTA CCCTTTGGAC AGGAGAGAAA ATGCCAACAG AGTTAGTTCG CCAAACCGTG
ATGGCAAAAC TTCAAGAATT ATAG
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| Protein sequence | MNSSTRIFAL LGRAVDYSYS PLIHNTAFQA LGLPYHYTIF NIAEAALVGD ALRGARALGL
GGFSVTIPYK QTVVPFLDEL SEEATTIQAV NCIVNKNGKL IGYNTDILGF ASPLFAYREA
LHGATIALFG SGGAALAAIE AFQRYFTPKQ VLLFARDSQK AKSQLRSSLA LERYTNLAIV
PLSDYERVRE CRLVINATPL GTKGRADGSA IIPLESNLLH SEHIVYDMVY NPTITPLLQA
AQAVGASTIF GIEMLIGQAE QAFTLWTGEK MPTELVRQTV MAKLQEL
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