| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1330 |
|---|
| Symbol | |
|---|
| ID | 3746611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 1796607 |
|---|
| End bp | 1798166 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637773867 |
|---|
| Product | apolipoprotein N-acyltransferase |
|---|
| Protein accession | YP_379633 |
|---|
| Protein GI | 78189295 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0815] Apolipoprotein N-acyltransferase |
|---|
| TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.17082 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCAAT TATCGAACTA TAATCAGGTA CGGCGCTCGC ATTATGTGGC GGCGTTGCTG
AGTGGCTTGC TGCTTGGCGT TGCATTTCCC TCCTATCCCT TTATTCGTCT TGAATTGTTG
GCATGGGTGG CACTGGTGCC GCTTTTGCTC TCATTGCGTG GTGTGGAACG TTTTGGGGCA
CTTTTTCGCC GTGTTTATTT TAGCATGTTG GTTTACGGCG CAATCGCGCT CTGGTGGGTT
TCGCTTGCAA CGTTGCCTGG CGGCATGTTA ACGGTCTTTA CGGATGCACT TTTTCGCTCT
ATTCCCTTTT TTCTTTTTTA TCTGCTTAAA AAACGGGTAG GCTACCATTT TGCGCTATCG
GCTTTTCCTT TTTTATGGAT TGGATGGGAG TGGCTCTACA TGCAGCAAGA GTTATCGTTG
GGGTGGCTGA CGTTTGGAAA TTCGCAAGCA CTACTCACCC CAATGGTTCA ATATGCTGAA
ATAACGGGCG TTTGGGGCGT AAGTTTTTGG CTTGTATGGT TTAATGTACT AACGGTTTTC
GCGGTTATTG GCAAACAGAG AAATCGCCTT GCCATTGTTG CCTCAATGGC GCTGATGGTG
GCGTTGCCAT TGCTCCATTC GTGGTGGCTG TTTGCTAATG CAGAGCTTAA TTCTGCTGCA
AAAAGAGAAC TTCGAGTAAC GCTTATGCAG CCAAACACCG ATCCGCACCA TGATTACGAC
CGTGCTGTTA TGGTGCCTCA CTACCTACGC ATAAGCTCAC AAGCGGTACG TGCTGAGCAT
CCAGCTTTAG TGATATGGCC TGAAACCGCC ATTTTATTTC CTTTATTAGA GCCTGTTTAC
CACCCAGAGT TCCAAATGCT TGAAGGAACG CTAAAAGAGT GGGATGCAGC ACTTTTAAGT
GGTGTAATTG ATAGGGTTAC AAGAGCTGAA CAATGGTCAA GTATTTATAA TGCTTCGGTG
CTCTTGCAGC CAGCGGGGCA GGTGCCGCAA ATGTATCGAA AAATGCACTT GGTGCCCTTT
GCTGAGCGCG TACCATTCCT TGATTACATT CCTTGGCTTG GCTATGCCAC CATGTCGCTT
TCGGGAATTA GTGGTTGGGA TAAAGGTACC GAACATGTGA TTATGCGACT AAAAACGCCA
CAGGGTACCG TTCGCATTGC AAATATTATT TGCTACGAAT CCATTTTTCC AGAACATGTT
GCCCGCTTTG TAGGGCGTAG AGCTGAATTG CTCACCATAG TAACCAACGA TGGCTGGTAT
GGAACCTCAT ACGGTCCGTA CCAACATCTT GCCATTGGGC GCTTTCGTGC TATTGAAAAT
CGGCGGGCTG TTGCTCGTTG TGCCAACACG GGTGTTACGG CATTTATTGA TCGCTATGGG
CGCATTATGG CAGAAGTGCC CTGGTGGCAG GAAGCAACGC TTACCGCTGA TGTACCACTT
GAGCGCGATC TAACTTTTTA TACCCAATAT CCCGATCTGT TGCCGCAAGG TGCGCTTGCC
GCATCATGCT TGTTTATTGC AATGGCGTTA GTGCGGCGCA AACGTTTTGA TGAGGTGTAA
|
|---|
| Protein sequence | MLQLSNYNQV RRSHYVAALL SGLLLGVAFP SYPFIRLELL AWVALVPLLL SLRGVERFGA
LFRRVYFSML VYGAIALWWV SLATLPGGML TVFTDALFRS IPFFLFYLLK KRVGYHFALS
AFPFLWIGWE WLYMQQELSL GWLTFGNSQA LLTPMVQYAE ITGVWGVSFW LVWFNVLTVF
AVIGKQRNRL AIVASMALMV ALPLLHSWWL FANAELNSAA KRELRVTLMQ PNTDPHHDYD
RAVMVPHYLR ISSQAVRAEH PALVIWPETA ILFPLLEPVY HPEFQMLEGT LKEWDAALLS
GVIDRVTRAE QWSSIYNASV LLQPAGQVPQ MYRKMHLVPF AERVPFLDYI PWLGYATMSL
SGISGWDKGT EHVIMRLKTP QGTVRIANII CYESIFPEHV ARFVGRRAEL LTIVTNDGWY
GTSYGPYQHL AIGRFRAIEN RRAVARCANT GVTAFIDRYG RIMAEVPWWQ EATLTADVPL
ERDLTFYTQY PDLLPQGALA ASCLFIAMAL VRRKRFDEV
|
|---|
| |