Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1244 |
Symbol | nifH |
ID | 3748282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 1707194 |
End bp | 1708018 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637773782 |
Product | nitrogenase reductase |
Protein accession | YP_379548 |
Protein GI | 78189210 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000240583 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAG TCGCAATTTA TGGAAAGGGT GGTATCGGCA AATCAACCAC CACACAAAAC ACCGTTGCCG GTCTTGCAGA AATGGGAAAA AAGGTCATGG TTATTGGCTG TGATCCAAAG GCTGACTCTA CACGTTTGCT CCTTGGGGGC TTGCAGCAAA AAACCGTGCT CGACACGTTG CGTGAGGAGG GTGAAGAAGT AGAACTTGAA GATATCATCA AAGAGGGATA CCGCAACACC CGTTGCACCG AGTCGGGTGG TCCTGAGCCT GGTGTTGGTT GCGCTGGTCG TGGCATTATT ACTTCGGTAA ACTTGCTTGA ACAGCTTGGC GCTTTTGATG ATGAATGGAA TCTCGATTAT GTGTTTTATG ATGTACTTGG CGACGTTGTA TGCGGTGGCT TTGCAATGCC TATTCGTGAT GGTAAAGCTG AAGAAATCTA CATCGTCTGC TCGGGTGAAA TGATGGCTAT GTACGCTGCC AACAACATCT GTAAAGGTAT TTTAAAATAT GCCGATGCAG GCGGTGTACG TCTTGGTGGT CTTATTTGCA ACAGCCGTAA GGTTGATAAC GAGCGTGAAA TGATTGAAGA GCTTGCTCGC CGCATTGGTA CCCAAATGAT TCACTTTGTG CCTCGCGACA ACTTTGTGCA GCGTGCTGAA ATCAACCGTA AAACCGTTAT TGACTACGAT CCAACTCACG GACAGGCTGA TGAGTATCGC GCATTAGCAC AAAAAATTAA CGATAACAAG ATGTTTGTTA TTCCAAAGCC ACTCGAAATT GAAGAGTTGG AATCGCTTCT TATTGAATTT GGTATTGCTA ACTAA
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Protein sequence | MRKVAIYGKG GIGKSTTTQN TVAGLAEMGK KVMVIGCDPK ADSTRLLLGG LQQKTVLDTL REEGEEVELE DIIKEGYRNT RCTESGGPEP GVGCAGRGII TSVNLLEQLG AFDDEWNLDY VFYDVLGDVV CGGFAMPIRD GKAEEIYIVC SGEMMAMYAA NNICKGILKY ADAGGVRLGG LICNSRKVDN EREMIEELAR RIGTQMIHFV PRDNFVQRAE INRKTVIDYD PTHGQADEYR ALAQKINDNK MFVIPKPLEI EELESLLIEF GIAN
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