Gene Cag_1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1220 
SymbolaroK 
ID3748254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand- 
Start bp1618311 
End bp1618883 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content48% 
IMG OID637773754 
Productshikimate kinase 
Protein accessionYP_379525 
Protein GI78189187 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.455019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAAAAAG AACCCTCTCT TATTTTTCTT ACCGGCTTTA GCGGTTCGGG TAAATCAACC 
ATTGGTCCGT TGCTTGCTAA TTCGTTGGGT TATGAGTTTG TTGATCTTGA TGCTTTAATT 
GAGCGTGAAT GCGGTAAGAG CATTAATCAG ATTTTTGCTG AAGCGGGTGA GGCGGCTTTT 
CGTCAGCATG AAGAGCAAAC CTTAGAAACC CTCTTAATGC GCCGCAAAAC GGTGGTTTCG 
CTTGGTGGTG GGGTGCTTGA ACAGCCGCGC GCCTTTGAGT TGGTGCGTCA AGCGGGTACT 
GTTGTCTATT TAAAGTCGCC TGTAAAAACG TTGGCTCGGC GGCTGAGCAA TAAAACGGAT 
CGCCCGCTTT TAAAGGGTGA GCAGGGTGAA AAGTTGTCGC AGGAGGAAAT TGAGCAAAAA 
ATTGCGGAGT TGCTTGCTCG GCGTGAGCCT CGTTATGAGT GCGCTGATAT TACGGTGGAG 
ACGGATGCCA AGCGTATTGG TAGTACGGTT GAGGAGCTTA CTCGTAAAAT TGAGCGTTAT 
ATGCGCACTC TTGCTTTATC GTCGGAGGAG TGA
 
Protein sequence
MQKEPSLIFL TGFSGSGKST IGPLLANSLG YEFVDLDALI ERECGKSINQ IFAEAGEAAF 
RQHEEQTLET LLMRRKTVVS LGGGVLEQPR AFELVRQAGT VVYLKSPVKT LARRLSNKTD 
RPLLKGEQGE KLSQEEIEQK IAELLARREP RYECADITVE TDAKRIGSTV EELTRKIERY 
MRTLALSSEE