Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1116 |
Symbol | |
ID | 3748334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 1505789 |
End bp | 1507711 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637773647 |
Product | DEAD/DEAH box helicase-like |
Protein accession | YP_379421 |
Protein GI | 78189083 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAC AACAGCTTCC TCTTGAAAAC AATTTTTTCT CGCTTCAACT TCCTGAACTT TTAATGAAAG CGCTCGAAGA GGTGGGTTAC GAAAGCCCAA CTCCTATTCA AGCACAAACT ATTCCTTTTT TGCTTGCAGG GCGCGATGTA CTTGGTCAAG CGCAAACGGG TACAGGTAAA ACTGCGGCTT TTGCTTTACC AATTCTTGCC TCTATTGATA TACAGCAAGC AGAGCCACAA GCGCTTGTGT TGGCTCCAAC TCGTGAGTTA GCTATTCAGG TTGCCGAAGC TTTTCAGCGT TATGCCGAGT ACCTAAAAGG GTTCCATGTA GTGCCAATTT ATGGTGGGCA AGATTATGGC ATTCAGTTCC GCATGTTGCG CCGTGGGGTG CAAGTTGTGG TTGGCACGCC CGGTCGTGTT ATGGATCACA TTCGTCGTGG TTCGCTGAAC CTTACCCACT TAAAGACGTT GGTGCTTGAT GAAGCTGATG AAATGTTGCG CATGGGCTTT ATTGATGATG TTGAGTGGAT TTTAGAACAA ACGCCTGCTG GGCGTCAAGT GGCACTCTTT TCAGCCACCA TGCCGCCGCC AATTCGTCGC ATTGCACAAA AGTATCTCGA CCAACCGGCT GAAGTTACCA TTCAAACGAA AACCACAACG GTTGATACCA TTCGCCAGCG TTATTGGGTG GTTGGTGGTA GCCACAAGCT TGATATTCTT ACCCGTATTT TAGAGGTAGA GCCGTTTGAT GGTATGATTA TTTTTTCGCG TACCAAAACC ATGACTATCG AACTTGCCGA AAAGCTGCAA GCGCGTGGTT ATGCCGCTGC GGCGCTGAAT GGCGATATGC CCCAAAATCA ACGTGAGCGT ACCATTGAGC AGCTTAAAAA TGGGAACATC AACATTGTAG TAGCTACCGA CGTTGCGGCG CGTGGACTTG ATGTTGAGCG CATTAGCCAT GTGGTAAACT ACGACATTCC ATCCGATACC GAATCCTACG TTCATCGCAT TGGGCGTACA GGGCGTGCAG GACGTGCAGG TGATGCCATT TTGTTTGTAG CACCTCGCGA AAAAAATATG CTCTATGCTA TTGAAAAAGC TACCCGTAGC CGCATTGAGC AAATGGTGCT GCCAACAACG GAGGTTATTA ACAACAAACG TATTGCAAAG TTTAATCAGC GTATTTCCGA TACCATTGCG GCTGAAGACC TTGGCTTTTT TACTCGCATG ATTGAGCAGT ATTGCAACGA GCACAATGTA CCCATGCTGG ATGCGGCTGC TGCGCTTGCC TCGTTAGTAC AGGGTGAAAC ACCTCTGCTG TTAGCCGATA AACCTGAGCG TAGCCGTTCA TCAGAGCGCG ATTCGTATGG CAGTAGCCGC GACCGTGGCT TTGAACGTGA AGGGCGCGAT AGTCGTAGTG GGGGACGTGA AGGACGTTCC GACCGTTTTG AACGTGATGG ACGAAGCGGG CGCGACGATC GTGGAGGACG TGATGAGCGT TCAGCACCTC GCAAACGGGG ACGGAGTGAA GTGTATGGCG AAGAGCCAAA AGATCGCTAC CGCCTTGAAG TTGGTAGCAC GCATGGCGTT AAAGCAGGCA ACATTCTTGG TGCTATTCTT AACGAAGCAG GCTTAGCTCC CGAATCCGTT GGACATATTT CCATCAGCGA CACCTACACC ACCATTGAGC TACCAAAGCA GATGCCCGAT ACCATGTTCC ATGAGTTGCG CAAAATTCGC GTATGCGGAC GCCAACTTCG CCTTTCTCGC ATGGAAGAGC ATGAAGGTGG ACACAGCACC CATAGCTCAC ATGGCACAGG AGCCTATGGC GGTGGTGCTA AAAAAAGCTT TCGTAAGCCA AACAAAAGCG CAAACGATGA AGGTGAATTT TTTGCGGGAT TTAAAAAAAA GCGTAAGGGA TAG
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Protein sequence | MSEQQLPLEN NFFSLQLPEL LMKALEEVGY ESPTPIQAQT IPFLLAGRDV LGQAQTGTGK TAAFALPILA SIDIQQAEPQ ALVLAPTREL AIQVAEAFQR YAEYLKGFHV VPIYGGQDYG IQFRMLRRGV QVVVGTPGRV MDHIRRGSLN LTHLKTLVLD EADEMLRMGF IDDVEWILEQ TPAGRQVALF SATMPPPIRR IAQKYLDQPA EVTIQTKTTT VDTIRQRYWV VGGSHKLDIL TRILEVEPFD GMIIFSRTKT MTIELAEKLQ ARGYAAAALN GDMPQNQRER TIEQLKNGNI NIVVATDVAA RGLDVERISH VVNYDIPSDT ESYVHRIGRT GRAGRAGDAI LFVAPREKNM LYAIEKATRS RIEQMVLPTT EVINNKRIAK FNQRISDTIA AEDLGFFTRM IEQYCNEHNV PMLDAAAALA SLVQGETPLL LADKPERSRS SERDSYGSSR DRGFEREGRD SRSGGREGRS DRFERDGRSG RDDRGGRDER SAPRKRGRSE VYGEEPKDRY RLEVGSTHGV KAGNILGAIL NEAGLAPESV GHISISDTYT TIELPKQMPD TMFHELRKIR VCGRQLRLSR MEEHEGGHST HSSHGTGAYG GGAKKSFRKP NKSANDEGEF FAGFKKKRKG
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