Gene Cag_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1106 
Symbol 
ID3748324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp1492925 
End bp1493572 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content45% 
IMG OID637773637 
Productglycosyl transferase 
Protein accessionYP_379411 
Protein GI78189073 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.648038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTTT CCTATCAGCC AACCGTTTCA ATTATTCTTG CCACCTTTAA CCGCGCTCAC 
TATGTAGCAC ACGCCGTGCA AAGCGTTGTT GAACAAACAA TAGATGATTG GGAATTGCTG
ATTGTGGATG ATGGAAGTGA TGATGCAACC TTTGATGTAG TAGCGCCATT TCTTGCCCAA
CACAGCAATA TTCGCTACAT GAAGCACAAA AACCGCAATG CAGCACTATC GCGCAATGCG
GGCATTCAAG CCTCGTTTGG GCAATACATC ACCTTTCTTG ATAGCGACGA TCGTTATGCA
CCCAATCACC TTGCTTCTCG CCTCAAAATA ATGGCAGAAA ATCCTGCGGT TGATTTACTG
AGTGGAGGAT TTTGGTGTGA AGAACCAACC TTGGTGAAGG ATCGCGATAA TCCCAAAAGG
CTCATTAATA TTCGAGAGTG CATTGTGTGC GGCACACTCT TCGGCAAACG AGAGCTGTTT
TTTGATTTGG AAGGATTTCG CAATGTTGCC TATGCGGAAG ATACCGATTT ATGGGAGCGA
GCATCCCTAC GTTTTGTAAC GAAAAAAATA GCTGCACCAG AAAGCTACCT TTACCAACGC
GCTCTCGACA GTATTACGTT GACCTATCAA GCAACCATGA ATGGCTGA
 
Protein sequence
MIFSYQPTVS IILATFNRAH YVAHAVQSVV EQTIDDWELL IVDDGSDDAT FDVVAPFLAQ 
HSNIRYMKHK NRNAALSRNA GIQASFGQYI TFLDSDDRYA PNHLASRLKI MAENPAVDLL
SGGFWCEEPT LVKDRDNPKR LINIRECIVC GTLFGKRELF FDLEGFRNVA YAEDTDLWER
ASLRFVTKKI AAPESYLYQR ALDSITLTYQ ATMNG