| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1018 |
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| Symbol | secA |
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| ID | 3746746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 1362394 |
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| End bp | 1365447 |
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| Gene Length | 3054 bp |
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| Protein Length | 1017 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637773547 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_379323 |
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| Protein GI | 78188985 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00760005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAA TTTTTGAGAA GCTTTTTGGC TCCAAACATG AAAAGGATGT AAAAAAAATA
CAGCCCACTA TCCAGCGAAT TAATGAATTG CAGCGCGCCT TAGCGAGCTT AAGTGATGAG
CAGTTGCGCC AAAAGGGACG CGAGCTTAAG CAAAAGGTGC GTGGTGTGCT GGAGCCTATG
GAATTGGAGC AGCAAAAGCT CTTTCACCAA CTTGATAGCC CCAATATTTC GCTTGATGAG
GCTGAAAGCG TCAATAATAA ATTAGATGAC TTGGCGGTAG CTTACGAAAC AGCCACCGCC
TCTGTGTTGG AAGAAATTCT GCCCGACACG TTTGCCTTGG TTAAAGAGAC CTGCGCTCGT
TTAAAAGGGC ACACGTATAA TGTTATGGGG CGCCAGTTTG TGTGGAATAT GGTGCCTTAC
GATGTGCAGC TTATTGGTGG CATTGTGTTG CATTCGGGCA AAATTGCCGA AATGCAAACG
GGCGAAGGCA AAACCCTTGT TTCAACCCTT CCTACTTTTC TTAATGCCTT AACGGGACGT
GGTGTGCATG TGGTAACGGT TAACGATTAC CTTGCGCAGC GCGATAAAGA GTGGATGGAG
CCGCTTTTTG CCTTCCATAA CCTCTCGGTG GGCGTTATTC TTACCTCCAT GCACCCCGCT
TTGCGACGTG CGCAATATTT GTGCGACATC ACCTACGGTA CCAACAATGA ATTGGGCTTC
GACTATTTGC GCGATAACAT GGCAAATACT CCTGAAGAGA TGGTGCAGCG CAAGTTTTAC
TATGCCATTG TGGATGAGGT GGATAGCGTG CTGATTGATG AAGCGCGTAC TCCGCTTATT
ATTTCGGGTC CTGTGCCCAA TGCCGATAAC AGCAAGTTTC AGGAAATTAA GCCGTGGATT
GAGCAATTGG TGCGTGCCCA GCAACAACAA ATTGCCGCAT GGTTGGGCGA TGCCGAAACG
CGCATGAAAA CCAATGCCAC CGATCCCGAA GCGGGCTTGG CACTTTTGCG TGTAAAGCGT
GGACAGCCTA AAAATAGCCG CTTTATAAAA ATGCTTTCGC AACAAGGGGT GGCGAAGTTA
GTGCAGATAA CCGAAAACGA GTATTTGAAG GATAACTCAA GCCGAATGCA CGAGGTGGAT
GATGCGCTTT TTTATGCGGT TGATGAAAAA GCCAACACTA TTGACCTAAC GGATAAGGGG
CGCGACTTTC TAAGCAAACT GAGCCATCAG GATAGCGACA TCTTTCTTTT GCCCGATGTT
GGAACAGAAA TTGCCACCAT TGAAAGCAAT GCGGCACTCT CTACTAATGA CAAAATTCAG
CACAAAGATG CGCTCTATCG CTTGTTTTCC GACCGTTCGG AGCGCTTGCA CAACATTAGC
CAATTGCTAA AAGCTTACTC GCTTTTTGAG CGTGATGATG AGTATGTGGT GCAAAATGGA
CAGGTGATGA TTGTGGATGA ATTTACGGGG CGCATTTTGC CCGGACGCCG TTACAGCGAT
GGGTTGCATC AAGCGATTGA GGCAAAAGAG AATGTGAAGA TTGAGGGTGA AACCCAGACT
ATGGCAACCA TCACCATTCA AAACTTCTTT CGCCTCTATA AAAAACTTGC AGGCATGACG
GGTACGGCTG AAACCGAAGC CTCTGAGTTT TACGAAATTT ACAAGCTCGA CGTGGTGGTA
ATTCCTACCA ACGCCTCAGT GGTGCGTAAG GATATGGATG ATCTGGTTTA TAAAACCCGC
CGCGAAAAAT ACAACGCCAT TGCACAAAAG GTGGAGGAGC TGCAAAAACG TGGTCAGCCC
GTGTTGGTTG GAACCACCAG CGTGGAAGTT TCGGAAACGC TGTCGCGCAT GTTGCGTACT
CGCCGCATTG CGCATAATGT ATTGAACGCC AAGCAAAATG ATCGGGAGGC GGAAATTGTT
GCCGAAGCAG GTCAAAAAGG GACGGTTACT ATTGCAACCA ACATGGCGGG ACGTGGCACC
GATATTAAGC TTGGTGACGG TGTTCGCGAA CTTGGAGGGC TTTACATTCT TGGCTCCGAG
CGCCACGAAT CGCGCCGCAT TGATCGCCAG CTTCGCGGAC GTGCGGGGCG TCAAGGCGAT
CCGGGTGAAT CGGTCTTTTA CGTATCGCTT GAGGATGAAT TGATGCGCTT ATTTGGCTCC
GATCGCGTTA TTGCAGTGAT GGATCGGCTT GGGCATGAAG AGGGCGATGT TATTGAACAC
TCCATGATTA CCAAATCCAT TGAGCGAGCA CAAAAAAAGG TGGAAGAACA GAACTTTGCT
ATCCGTAAAC GCCTGCTTGA ATATGATGAT GTGCTCAATC AACAGCGCGA AGTCATTTAC
TCACGCCGCA AAAATGGATT GCTTAAAGAG CGCCTTACCA GCGATATTCT TGACCTCCTG
AAAGATTATA GCGACACCAT TGTTAAAAAG TATCACAAAG ATTTTGATAC CGCAGGGCTT
GAAGAGCAAC TCATGCGCGA CCTCTCCATT GAGTTTCAGC TTGACCGTGC AACCTTTGAG
CGCGAAGGAA TTGATGCCGT TGTTGATAAA GTATATGAAA CGGCACTTAC CTTTTACCGC
CGCAAAGAAG AGAGCCTCCC TGCCGATATT ATGTGCCAAA TTGAAAAGTA CGCCGTGCTC
ACCGTCATTG ACCAACGTTG GCGCGAACAC CTCCGCGAAA TTGACTCATT ACGCGAAGGC
ATTAACCTGC GTGCTTACGG GCAGAAAGAT CCGCTTATTG AGTACAAGCA AGAAGCCTTC
CGCCTCTTTA TTACGCTTTT AAAGGAAATT GAAGCCGAAA CCCTTTCGCT TGCCTTTAAG
CTTTTCCCGA TTGACCCCGA AGAGCAGCAA CAAATTGAAG AGCGCCAACG CCAATCAGCA
ATTCGCCAAG AAAAATTAGT TGCCCAGCAC GATGTTGCTG AAAGCTTTGT TGGTTTGAAT
GATGATGATG AGCCATTGCC TGCGCAACCC ATAACAACTG AGCAAAAACC AGGGAGAAAT
GATCTTTGCC CTTGCGGAAG TGGTAAAAAA TATAAAGCGT GCTGTGGGCA GTAA
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| Protein sequence | MLKIFEKLFG SKHEKDVKKI QPTIQRINEL QRALASLSDE QLRQKGRELK QKVRGVLEPM
ELEQQKLFHQ LDSPNISLDE AESVNNKLDD LAVAYETATA SVLEEILPDT FALVKETCAR
LKGHTYNVMG RQFVWNMVPY DVQLIGGIVL HSGKIAEMQT GEGKTLVSTL PTFLNALTGR
GVHVVTVNDY LAQRDKEWME PLFAFHNLSV GVILTSMHPA LRRAQYLCDI TYGTNNELGF
DYLRDNMANT PEEMVQRKFY YAIVDEVDSV LIDEARTPLI ISGPVPNADN SKFQEIKPWI
EQLVRAQQQQ IAAWLGDAET RMKTNATDPE AGLALLRVKR GQPKNSRFIK MLSQQGVAKL
VQITENEYLK DNSSRMHEVD DALFYAVDEK ANTIDLTDKG RDFLSKLSHQ DSDIFLLPDV
GTEIATIESN AALSTNDKIQ HKDALYRLFS DRSERLHNIS QLLKAYSLFE RDDEYVVQNG
QVMIVDEFTG RILPGRRYSD GLHQAIEAKE NVKIEGETQT MATITIQNFF RLYKKLAGMT
GTAETEASEF YEIYKLDVVV IPTNASVVRK DMDDLVYKTR REKYNAIAQK VEELQKRGQP
VLVGTTSVEV SETLSRMLRT RRIAHNVLNA KQNDREAEIV AEAGQKGTVT IATNMAGRGT
DIKLGDGVRE LGGLYILGSE RHESRRIDRQ LRGRAGRQGD PGESVFYVSL EDELMRLFGS
DRVIAVMDRL GHEEGDVIEH SMITKSIERA QKKVEEQNFA IRKRLLEYDD VLNQQREVIY
SRRKNGLLKE RLTSDILDLL KDYSDTIVKK YHKDFDTAGL EEQLMRDLSI EFQLDRATFE
REGIDAVVDK VYETALTFYR RKEESLPADI MCQIEKYAVL TVIDQRWREH LREIDSLREG
INLRAYGQKD PLIEYKQEAF RLFITLLKEI EAETLSLAFK LFPIDPEEQQ QIEERQRQSA
IRQEKLVAQH DVAESFVGLN DDDEPLPAQP ITTEQKPGRN DLCPCGSGKK YKACCGQ
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