| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0972 |
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| Symbol | |
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| ID | 3746897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 1310941 |
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| End bp | 1312002 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637773502 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_379278 |
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| Protein GI | 78188940 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTC GAACCTTTAT TGTGATTATT GCTGGAGTAC TTGCTTCGGT GGTTGGTGGC
TATTTGGTGC TGCATCAAGA AAAACAAGAA GCCCCAAAAA TTGCCGTGCA AGCCGAGCGC
CCCATTCCAG TATCTATTGT GGCTGTTGCC GCCGCAACCG TGAGCGATAC GCTTAACCTT
GTGGGCGAAA TACAAGCTAT TCGTGAAGCC GATATTGTGG CTGAAGTGGA AGGGCAGGTG
CGTCGCATAG CGGTGGAGCC CGGTGAGCGT AAAGAGAAGG GGGCGCTGTT AGTGGCGCTT
GATGATGAGG TAGCAGCAGC TCGCAAGAAA AAAGCGGAGC TGCATTACCG TCAAGCAGCT
CGCACGGCTG AGCGCTATAG TGCGCTTTAC CGCGACGGCG CTGTGTCGCT TTCAGCGTAT
GAAGCTATGG AGTTGCAGCG TGAGGAGGCG CAAGCCGAAT TGGTGTCGGC AACAAAGCAT
ATGCAAAATG CAGCAATTCG CGCACCATTC GGTGGTGTGG TAACCTCGCG CCTTGTAAGC
GAAGGGGAGT TGGTGCGTGT TGGCACAAAA GTGGCACACA TGGCAGATTT TTCGCGCACC
AAAGTGGTGC TTTATGCGCC TGAGCGCACA TTGCCGCTTT TTGTGCTGGG CAAATCGGTG
CTTGTAAGCA GCAACCTTTT CCCCGATAAA CGCTTTAGCG GCAAAGTAAG TGCTATTAGC
GATCGTGCTG AAAGGGCGCA CAATTATCGC ATTGAAGTGC TGTTGAATAA TGAAAGTCGC
TCGATTCCTT TCCGTTCAGG CATGTTTGCA CGAGTGTTGG TGCCAAGCGA AGGGGAGCGT
CAAGCGCTGG TGGTGCCACG TCGAGCATTG GTGAACGGGA TGCGCAATCC TGCAATTTTT
GTGGTGCGCA ACGGACGAGC ATGGTTTACA CCCATTATTG CAGGTATGGA AATGCCGCGC
GAATTTGAAG TGCTTGGTGG CTTAGTAGCT GGCGATAGCG TTATTGTGAG TGGTCAACAA
GAGCTGCGCG ATAAAGCACG GGTTGAGGTG GTTCATCGCT AA
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| Protein sequence | MKRRTFIVII AGVLASVVGG YLVLHQEKQE APKIAVQAER PIPVSIVAVA AATVSDTLNL
VGEIQAIREA DIVAEVEGQV RRIAVEPGER KEKGALLVAL DDEVAAARKK KAELHYRQAA
RTAERYSALY RDGAVSLSAY EAMELQREEA QAELVSATKH MQNAAIRAPF GGVVTSRLVS
EGELVRVGTK VAHMADFSRT KVVLYAPERT LPLFVLGKSV LVSSNLFPDK RFSGKVSAIS
DRAERAHNYR IEVLLNNESR SIPFRSGMFA RVLVPSEGER QALVVPRRAL VNGMRNPAIF
VVRNGRAWFT PIIAGMEMPR EFEVLGGLVA GDSVIVSGQQ ELRDKARVEV VHR
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