| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0871 |
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| Symbol | |
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| ID | 3747332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 1202157 |
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| End bp | 1203377 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637773402 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_379179 |
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| Protein GI | 78188841 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.75327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCTA TAGAGAAAAA AACCGTGCGC TTGTTGGCGG TTATTGTGCC GTTGTTCCTA
CTTTTTGCTT TTGTGGCATT CCGTTCTGGT CCATTAGCGC CTGTGCCTGT AACGGTTACG
CGTGTGCAGC AGCAAGCGCT AACGCCAGCG CTGTCGGGCA TTGGTACGGT TGAGGCGCGT
TATGCTTACC GCATTGGTCC CGTAGCCTCT GGACGGGTGC TGCGTTTGTT GGTGGATGTG
GGTGATACGG TGCGGGCAGG GCAGGTGGTG GGCGAAATTG ATCCTGTGGA TTTGGAGGAG
CGCTTGCTTG CTCGCCGTGC AGCGGTGCTG CGTGCAGAAG CTGTGGTGCG TTCGGCAGCG
GCTAAGTTGC ACGATGCTGA AGCGCGGCAG CGTTTTGCTG TTGGGCAGGA GCAGCGTTAC
ACCGAGTTGC TGGCGGTGCG GGCAGCAAGT AGTGAGCAGG TGGAGGCAAA GCGGCAGGAG
GCGGAGGTGG CGCGTGCAAC CGCATTGTCG TCGCAAGCGG CGTTAGTGGC GGCGCGTGAG
GAGCTTGCGG CGGCAAAGGC TGATTATCAA GGGTTGGAGG AGCAGCGGCG GAATTTGCTT
TTAATTGCGC CTGCCGATGG ATTGGTAACC AATCGCTTAG TGGAGGCTGG TAGCACTGTG
GTTGCAGGGC AAAGCGTGCT CGAAATTATT AATCCACAAA GCGTGTGGGT TGCGGCGCGT
TTTGACCAAC TGCAAAGTGC AGGCTTGCGT GCGGGTTTGC CTGCTACCGT GCGTCTTCGG
TCGCAAGCAG GTGCGCCGTT AGCTGCCTCA GTTGAACGCA TTGAGCCGCT TGCCGATCGC
ATTACTGAGG AGCTGTTGGC TAAAGTGGTT TTTAATGTGC TGCCAAATCC TCTCCCTCCA
ATTGGTGAAT TGTGCGAAGT AAGCGTAGGG CTTCCCTCAC TGCCGAGAAC TCCCGTTGTG
CCAAACGCCA GCGTGCACCG TAGTGAAAGC CATGGGGGTA AACTTGGTGT TTGGGTGGTT
GAAGGTTCAT CACTACGCTT TGTGGAAGTG CGCATTGGAG CAACTGACCA AATGGGCAAT
GTGCAAATTC TTTCGGGGTT GAAGGGTGGC GAGCAAGTGG TGGTTTATAG CAAAAGTGCG
CTGAATGAGG GCAAGCGCAT CACTATTGTA AAGCCCACTT CAAAGCAAGG GGCGCAAGGG
GTACAGGGGG GCTTGCAATG A
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| Protein sequence | MKAIEKKTVR LLAVIVPLFL LFAFVAFRSG PLAPVPVTVT RVQQQALTPA LSGIGTVEAR
YAYRIGPVAS GRVLRLLVDV GDTVRAGQVV GEIDPVDLEE RLLARRAAVL RAEAVVRSAA
AKLHDAEARQ RFAVGQEQRY TELLAVRAAS SEQVEAKRQE AEVARATALS SQAALVAARE
ELAAAKADYQ GLEEQRRNLL LIAPADGLVT NRLVEAGSTV VAGQSVLEII NPQSVWVAAR
FDQLQSAGLR AGLPATVRLR SQAGAPLAAS VERIEPLADR ITEELLAKVV FNVLPNPLPP
IGELCEVSVG LPSLPRTPVV PNASVHRSES HGGKLGVWVV EGSSLRFVEV RIGATDQMGN
VQILSGLKGG EQVVVYSKSA LNEGKRITIV KPTSKQGAQG VQGGLQ
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