| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0840 |
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| Symbol | |
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| ID | 3746800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 1166236 |
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| End bp | 1170351 |
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| Gene Length | 4116 bp |
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| Protein Length | 1371 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637773370 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_379149 |
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| Protein GI | 78188811 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATAG AATTAAAGGC AAAATATTTA GGAAAGACAC CAAAGGATAA GGCAAAAATT
CTTATTGCTC AATCTTCTTG GGAAAAGACT CAATTGGCCA GGGATGAAAA CCAATGTTAC
AAACTAAGTC TAACGGAAGA AAATGAAAAG TTTATTGATA GTATTCTTGA ATTAGGCAAC
GGAAAGGAAG TTGACCTGAT TGTCTTTCCT GAGTTTTCTA TACCGGAAAA ATATCTTGAG
AAAATCAGAG AATGGACATT TCATAATCAA ATTATAGTTA TTGCTGGAAG TGCAAATCTT
CAACGAGAAG AAAAATATTA CAACACATCC TCAATCTTTT TTGAAGGCAT ACCATACAAA
ACTGAAAAAC ATGACCTATC TCCCTTAGAA ACATCAAATC TTTTGGGCGG TTATGGACCT
TCATCAGGAA CAAATCAATT TTACTTTACG GAAACACCTA TCGGAGAACT CGGTGTAATG
ATTTGTGCAG ATGAGTTTGA CAGACAAACA AGGAATGAAT TCTTGAAACA CAATATTGAC
ATTCTTTGTG TTATTGCGTT TCAGCAAAAA GGTAAAGACC ACCACCAATC TATTAATGAG
ATTGTAAAGG AATCAAATAA TGGGATTTAT GTTGCCTATG CAAATGCTTT ATGTAATTCA
TGGACGGATG GGCATTCAGC ATTCTTTAGT AATGAATATA GAGAAGGACG GGTTGAATAT
GTTGAAACTG GCTTAACCAA AGATGATGGT CTTGAAATGA AATTAGTTGA AATGCCATCA
AATGCTGGAT GCTTAATTGT TGAGTGTAAT TTAAAAAGTA AGAAACCTGT AATCAGAAAT
CTTGACCCAA ACCGTGCATT GGTTAATGCT GAACTCCCGT ACGTTTTTGA AAATGGAGGC
CTACGCCAGT TTACAAAAGA AGAACTTAAA AAGCCAGATG AAAAGTCTAA TAAAGTTAAA
GCTGAATACC AGCCTTCAAT CCCACCAATA AAAGCATTTG TTGCAGATTA TATTGGACGG
CAAACAGATG TTGAATACTT AAGTGAATTT CTGAACAATC CTCAAAAGCA TTTTTGTCTT
TTATATGGAG TAGGCGGAAT GGGTAAATCT CATCTGCTTT ATTGCTGTAT GAAAGATTAT
AAACAAAAGA CTTTTTTTTA TCATGTAGTT AGTCCAAATG AAGAATTCAC ATTAAATAAA
TTGTTTGAAG TATGCTTGCT TCCAAAGCCT GATGCTAAAT TATCTTTGGA AGAAAAGCAA
AATCATTTTG TAAAAAAATT TCAAGAAAAT AATATACACC TGATTCTTGA TGACTATTAC
GAAGTTCAGT TGGATGAGGT AAAATCTATT TTGCCAAAAC TAACAGGTAT TGGAAAGGGG
AAATTGTTAC TTCTTTCAAG AATCATCCCT TCAAATATAA GTTATATTAA AGCTGACTAC
TTAAACCATA AAATACTTCC CTTAACAGAA CCCGATTTCA AACAAGTAAT TCAAAATTTT
ATTCTTGATA AAAACTTAAC TCTGACAGAT GAAGAAATCC ATTTGATTTA CGAAAAAGCT
CAGGGCTATC CGCTCGGAGG CCAATTGATT ATTGATGCCA AACCATACAG TAAGAACTTG
CTGGAATTGC TAACCAACCT TGGAAAGTTT GAAGCAGAAA TTGACCCTGA CGGAAAAATC
TATAGCGGTC GAATACTTGA CAACATTTTT AAAAAGGGTA ATAATAAGGA AATTAAGCTG
CTTTGTGAAT TCAGTGCATT GTTTGGTGTT TCAGATATTG AGACGGTCAG GCAATTGCCA
TCTTATAACT TGAATCTTTT CCAAGGATTA CACAGCCGAA AAAGTTTTGT GGATATGGAT
GTTCAGGGAA AATTCAGTAG TCATGCGATG ATTAGAGACT TTGCTTATCA TAGATTGCAA
AACAAGGAAG CATTACATCT TAAATTGGCA AAGTATTTTG AAAATAATAT TAACGGTAGA
ACGGATGATG ACTGGAAATG GCTGAATGAA GCAATTTTAC ATTATACGAA ATCACCAAAA
GCCGAACATT TCGCTTTCAT AAATCGTGTT GAAAGAAATT TTGAAAGCCG AAATATTAAA
GAACAAATTG ATAAAAATAG CATTCTCAAA ACAATCCGCA ATTACACTAC ACTTTTAAAC
CTTTATCCAG ACAAACCGGC ATATTATAAT GAACTGGGAA TTGCTTATAG AATGAATAGG
CAACAAAGGA ATGCGATAGA AACCTTTGAG AGGGCTTTGG TGATTGATCC GAAAGATTTA
CCCTCATTAA ATGAATTGGG CATTACCTTT CGGGAAAACA ATCAGAAAAC AAAAGCGATA
GAAACCTTTG AGAGGGCTTT GGTGATTGAT GCAAAACACT TACCCTCATT AAATGAATTG
GGCATTACCT TTCGGGAAAA CAATCAGAAA ACAAAAGCGA TAGAAACCTT TGAGAGGGCT
TTGGTGATTG ATGCAAAACA CTTACCCTCA TTAAATGAAT TGGGCATTAC CTTTCGGGAA
AACAATCAGA AAACAAAAGC GATAGAAACC TTTGAGAGGG CTTTGGTGAT TGATGCAAAA
CACTTACCCT CATTAAATGA ATTGGGCATT ACCTTTCGGG AAAACAATCA GAAAACAAAA
GCGATAGAAA CCTTTGAGAG GGCTTTGGTG ATTGATCCGA AAAATTTACC CTCATTAAAT
GAATTGGGCA TTACCTTTCG GGAAAACAAT CAGAAAACAA AAGCGATAGA AACCTTTGAG
AGGGCTTTGG TGATTGATGC AAAACACTTA CCCTCATTAA ATGAATTGGG CATTACCTTT
CGGGAAAACA ATCAGAAAAC AAAAGCGATA GAAACCTTTG AGAGGGCTTT GGTGATTGAT
GCAAAACACT TACCCTCATT AAATGAATTG GGCATTACCT TTCGGGAAAA CAATCAGAAA
ACAAAAGCGA TAGAAACCTT TGAGAGGGCT TTGGTGATTG ATGCAAAACA CTTACCCTCA
TTAAATGAAT TGGGCATTAC CTTTCGGGAA AACAATCAGA AAACAAAAGC GATAGAAACC
TTTGAGAGGG CTTTGGTGAT TGATCCGAAA GATTTACCCT CATTAAATGA ATTGGGCATT
ACCTTTCGGG AAAACAATCA GAAAACAAAA GCGATAGAAA CCTTTGAGAG GGCTTTGGTG
ATTGATGCAA AACACTTACC CTCATTAAAT GAATTGGGCA TTACCTTTCG GGAAAACAAT
CAGAAAACAA AAGCGATAGA AACCTTTGAG AGGGCTTTGG TGATTGATGC AAAACACTTA
CCCTCATTAA ATGAATTGGG CATTACCTTT CGGGAAAACA ATCAGATTGA AGAGGCTATA
AAGGTATGCA AGCGGGCTTT GAATATTTCA AAGGATAGGC AATTATATTT AAATCTTTTA
CAGATTTATT TATTTTTTAA ATCAGACAAA CAGATTTCGA AAGAAATTTA TGATATTCTT
TTGATGCCAC CTCGACTTCA TGCTTTTTCT GCATCTCGCA AAAAATATGA AAATATAATT
CGAGATATGG ATTACCTTTT AAGCATCTCG TTTGATGATG TTAAACAATA TGAGAGTTTT
TTATTTCTTG CAATTCAATA CAAGGCTTAT GAAAAGGTGC TATTTATATT AGAAAAACTA
AACGACCAGT TTCCTGATAA TTCAAAAATC AAAAGCCGTT TAGGTAAAAC ATTAAGCAAC
CAAGTTATTG GTGAACATGA GAAAGGAGGA AGATTTTTAA AACAAGCAAT TGGACTTTTC
AAAAAAGAAA ATAACATTCA ACAATTGCAA GGTCATATCA TTTACTATTT TTACAACCTA
TTGAACCAGA ATCAAATAGA ATTAATAGAA AAAGAAATGA TGACCTACGA AAAAGATTTG
ATTTATGATG CCAACTATTT TAGGTTCATG GCTAATTTTT CATTTGTTAA AAATTCAAAC
ATTAATGATG CAATTAGTTA CTTTGAAAAA GCTATTGAAA TCTCCGAAGT TTTAATGGAT
AAGAAAGAAT TTGCAGAATC TTTGTTGAGG TTTTTATCAG AACAGAAAAG TTTACATTAC
AAAACGTATT TTGTAAAATA TGAAAAGTAT ATTTAG
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| Protein sequence | MSIELKAKYL GKTPKDKAKI LIAQSSWEKT QLARDENQCY KLSLTEENEK FIDSILELGN
GKEVDLIVFP EFSIPEKYLE KIREWTFHNQ IIVIAGSANL QREEKYYNTS SIFFEGIPYK
TEKHDLSPLE TSNLLGGYGP SSGTNQFYFT ETPIGELGVM ICADEFDRQT RNEFLKHNID
ILCVIAFQQK GKDHHQSINE IVKESNNGIY VAYANALCNS WTDGHSAFFS NEYREGRVEY
VETGLTKDDG LEMKLVEMPS NAGCLIVECN LKSKKPVIRN LDPNRALVNA ELPYVFENGG
LRQFTKEELK KPDEKSNKVK AEYQPSIPPI KAFVADYIGR QTDVEYLSEF LNNPQKHFCL
LYGVGGMGKS HLLYCCMKDY KQKTFFYHVV SPNEEFTLNK LFEVCLLPKP DAKLSLEEKQ
NHFVKKFQEN NIHLILDDYY EVQLDEVKSI LPKLTGIGKG KLLLLSRIIP SNISYIKADY
LNHKILPLTE PDFKQVIQNF ILDKNLTLTD EEIHLIYEKA QGYPLGGQLI IDAKPYSKNL
LELLTNLGKF EAEIDPDGKI YSGRILDNIF KKGNNKEIKL LCEFSALFGV SDIETVRQLP
SYNLNLFQGL HSRKSFVDMD VQGKFSSHAM IRDFAYHRLQ NKEALHLKLA KYFENNINGR
TDDDWKWLNE AILHYTKSPK AEHFAFINRV ERNFESRNIK EQIDKNSILK TIRNYTTLLN
LYPDKPAYYN ELGIAYRMNR QQRNAIETFE RALVIDPKDL PSLNELGITF RENNQKTKAI
ETFERALVID AKHLPSLNEL GITFRENNQK TKAIETFERA LVIDAKHLPS LNELGITFRE
NNQKTKAIET FERALVIDAK HLPSLNELGI TFRENNQKTK AIETFERALV IDPKNLPSLN
ELGITFRENN QKTKAIETFE RALVIDAKHL PSLNELGITF RENNQKTKAI ETFERALVID
AKHLPSLNEL GITFRENNQK TKAIETFERA LVIDAKHLPS LNELGITFRE NNQKTKAIET
FERALVIDPK DLPSLNELGI TFRENNQKTK AIETFERALV IDAKHLPSLN ELGITFRENN
QKTKAIETFE RALVIDAKHL PSLNELGITF RENNQIEEAI KVCKRALNIS KDRQLYLNLL
QIYLFFKSDK QISKEIYDIL LMPPRLHAFS ASRKKYENII RDMDYLLSIS FDDVKQYESF
LFLAIQYKAY EKVLFILEKL NDQFPDNSKI KSRLGKTLSN QVIGEHEKGG RFLKQAIGLF
KKENNIQQLQ GHIIYYFYNL LNQNQIELIE KEMMTYEKDL IYDANYFRFM ANFSFVKNSN
INDAISYFEK AIEISEVLMD KKEFAESLLR FLSEQKSLHY KTYFVKYEKY I
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