| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0791 |
|---|
| Symbol | |
|---|
| ID | 3748076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 1111663 |
|---|
| End bp | 1112328 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637773321 |
|---|
| Product | cell wall-associated hydrolase (invasion-associated proteins)-like |
|---|
| Protein accession | YP_379100 |
|---|
| Protein GI | 78188762 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAGA AAACTATTTG CCCATCCACT CATTGGATGG GTTGCCCGTA TTCGCTATGG
CAACGCTTCT CCCGTGCCGT TGCTGCTCTT GCTACCCTTT CTACACTCTC TTGTATTGCT
CCCTCCTCAA TTGTGTTGGC AAACCCTATT GCACCACCAC AAAGCACTGC GGTTGATGTT
GTAGCTGAAA ATCCATCTAC CCCAATAGCA TTAGACCCCC CAACCCCGTC AAAATTAGAG
CAACTCATGG GTAATATGGG GAACTATTTT GGGATTCGTT ATCGCTTTGG TGGTCAAACA
CCTGCTGGTT TTGATTGCTC GGGTTTTGTG CGATACATGT TTGAAAAGGT TTACAACATC
AAGCTTCCTC ACTCTTCACG CGAAATGTCA TCACTTGGTG ATAGAATTAG TCGTGAGGAA
TTAAAGCCTG GCGATTTAGT TTTTTTTCAT TCAGGTAAAA ATCGGATTAA CCACGTTGGT
ATTTACATTG GTAACGATGC CTTTATTCAC TCCTCTCTTT CTAAAGGCAT TACTGAAGAC
AAGCTACAAC ATCGTTACTA CGATAAACGT TATGCTGGTG CTGTAAGAAT TTTACCCGAT
ATTACTCTTC CCTTCTCTAC GCCTCGCCAA GAGGATGCAC AACTTGAAAT AATAAAGCCG
TCATAA
|
|---|
| Protein sequence | MSQKTICPST HWMGCPYSLW QRFSRAVAAL ATLSTLSCIA PSSIVLANPI APPQSTAVDV
VAENPSTPIA LDPPTPSKLE QLMGNMGNYF GIRYRFGGQT PAGFDCSGFV RYMFEKVYNI
KLPHSSREMS SLGDRISREE LKPGDLVFFH SGKNRINHVG IYIGNDAFIH SSLSKGITED
KLQHRYYDKR YAGAVRILPD ITLPFSTPRQ EDAQLEIIKP S
|
|---|
| |