Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0788 |
Symbol | |
ID | 3748073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 1106516 |
End bp | 1107751 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637773318 |
Product | transposase |
Protein accession | YP_379097 |
Protein GI | 78188759 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3464] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGATA CAGTTCTTTT TCAGCAAGCC TTGTGTTTAC CAATGCCATG GTTTGTCAAA TCATCAGCAT TTGACATAGA GCAAAAACGC CTCACCATCC AGCTTGATTT TCAGAAAGGG AGCACTTTTA GTTGCCCAAC ATGCGGTCAG CATGACTTAA AAGCCTATGA TACGGCAGAG AAACAGTGGC GTCATCTGAA TTTTTTTCAG CATGAATGCT ATTTAACAGC ACGCGTACCA AGGATTTCGT GCCCCACTTG TGGTGTTAAA GCAATCACTG ATTTACCATG GGCGCGTCGC GACAGCGGCT TTACGCTCTT GTTTGAAGCA ATGATTATCG CATTAGTACC ATCAATGCCC TGTAAAACGA TAGCCAACTA TGTTGGAGAA CATGATAGCC GTATCTGGCG CATTATTCAT TACTACCTTG ATGAGGCACT AGAACAGCAA GATTTATCAG CAGTTACCAA AGTTGGACTT GATGAAACAG CTAGCAAGCG AGGGCACAAC TATGTAACAA GCTTTGTTGA TTTAGAGAGT TCAAAAGTGT TGTTCGTTAC AGAAGGTAAA GATGCTACAA CCGTTGAAAA ATTTCATAAG CATTTGCTTG CTCATAAAGG TAAAGCTGAA AATATTAAAG AAATTTGTTG CGATATGTCG CCAGCATTTA TCAAAGGAGT TACTACCAAC TTTCCTGAAA CCCATATCAC CTTTGATAAA TTTCACATCA TACAAGTCTT AACAAAAGCT GTTGATGAGG TGCGTCGTGA AGAACAAAAA GAGCGTCCTG AATTAGCTAA AAGTCGCTAT CTCTGGCTTA AAAATCAGGT GCATCTTAAC CAATCACAAC AAGTAAAATT GGAAAAGTTA CAGCTCAAAA AACTCAATTT GAAAACAGCG CGTGCTTATC AAGTGAAGCT GAATTTTCAA GAGTTTTTTA AGCAAGCCCC TGCCTATGCA CAAAGCTTTC TCAATCAATG GTATTACTCG GCAAGCCATA GCCGTCTTGA ACCAATCAAA GAGGCTGCAC GAACTATTAA GCGGCATTGG TATGGTATTC TCCGCTGGTT TACTTCAAAC ATTACCAACG GTAAATTAGA GGGGCTTAAT AGTATGATTC AAGCCGCTAA AGCTCGGGCT CGAGGTTACC GAACAACTAA CAATCTTATC GCTATGATCT ATTTTATTGG TAGTAAATTC GAGTTTGCTT TACCTGCCCT TACCCACTCG AAATAG
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Protein sequence | MKDTVLFQQA LCLPMPWFVK SSAFDIEQKR LTIQLDFQKG STFSCPTCGQ HDLKAYDTAE KQWRHLNFFQ HECYLTARVP RISCPTCGVK AITDLPWARR DSGFTLLFEA MIIALVPSMP CKTIANYVGE HDSRIWRIIH YYLDEALEQQ DLSAVTKVGL DETASKRGHN YVTSFVDLES SKVLFVTEGK DATTVEKFHK HLLAHKGKAE NIKEICCDMS PAFIKGVTTN FPETHITFDK FHIIQVLTKA VDEVRREEQK ERPELAKSRY LWLKNQVHLN QSQQVKLEKL QLKKLNLKTA RAYQVKLNFQ EFFKQAPAYA QSFLNQWYYS ASHSRLEPIK EAARTIKRHW YGILRWFTSN ITNGKLEGLN SMIQAAKARA RGYRTTNNLI AMIYFIGSKF EFALPALTHS K
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