| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0752 |
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| Symbol | |
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| ID | 3746501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 1058684 |
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| End bp | 1061068 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637773284 |
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| Product | ribonuclease R |
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| Protein accession | YP_379064 |
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| Protein GI | 78188726 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGAAAA AACGTTCAAG ACGCAAAAGC AAAGATTCGG CATACAAAGG CAAAAAGCCC
TCCACACGTG TGCCTCAAGG TGATAGGGTT AGCCCCAATG ATCATCTTCT TATTAACGAA
TTTCTTTTTA AGCGAGGCGA AACCTCTCTT GCAGCCGAAA TTGTAACCTT TTTTGCTGAT
CATGAAGGGG AGCGCTTTCG CTCGGTTGAA CTTGCCCGAT TACTTGGTTA CACGGAATCG
CGCCAGTTGC CCGGCTTTTG GTATGTGCTC CACAAGCTCC ATGAAGATGG TACGCTTGAT
AAGGATTCCA ACCGTAGCTA TGGCATGGTT GGCATTGACG ATGCTTCGTA TCAAGATCAT
TTAGTGCATG TTAAACCATT CCCTCTGCTT GGTAAAAAGC AGTACAAAGC GGGGGAGCTT
TATAGTGGAC GACTTATTAC CCATCCCAAT GGCTACGGCT TTTTGGAAGT TGAGGGCTTT
GATGATGATA TTTTTATTAA AGCGGGTGAT TTGGGTGCAG CATTGCATGG CGATGAGGTG
GAGGTTTTGG TTTCAAGTAC GCCCGAAACT TATACCGCAA AAGCTTCACC CCATCAGCGC
TGCGAAGGCG TTGTGCAGCG CGTCATTAAC CGTCATCTTA CCATGATAGT GGGCACGCTC
ACCAAAGTTG CCCGCAAATT CCAGCTTAAG CCTGACGATC GTAAAATTCT CCCTGAAATT
TTTGTAGCCC TTAAACATGC TCGTAAAGCA AAAGATGGGC AGAAGGTGCT TGTGGGTGAA
CTTGATTTTA CCCAGTTGGG TGAGATTAAT GGCAAGGTGG TGGAAATTTT AGGCACAGCA
GGCGATTCAG CGGTTGAAGT AAGCGCTATT GCGCGTAGCA AAGGCATTGA TGAAACCTTT
GACGATGCGT TGTTGCAACA GGTGCAGTCG GTAAGCGATA CCATTAGCGA GGCAGATATT
AAGGATCGGC TTGATATTCG CGACAAAGTG GTGTTTACCA TTGACCCAAT TGATGCGAAG
GATTTTGATG ATGCGCTTTC GGTGGAGATG TTGGAGGACG GGCTCTGCCG TGTGGGCGTG
CATATTGCCG ATGTGTCGCA CTATGTACAG GAGAATTCCC CCCTTGATCG CGAAGCGCAA
AAGCGTGCCA CTTCGGTTTA TTTGGTTGAC CGCGTTATTC CCATGCTGCC AGCTCGTTTA
TCGGAGCAAA TTTGCAGCTT AAATCCGGGT GTTGATCGCA TGGCGTATTC GATTTTTTTC
ACCCTTACGC CTGAGGCTGA GGTGCGCAAT TATGAGTTCC ATAAAACCGT TATTCATTCG
AAGCGCCGCT TTACCTACGA GGATGTAGAA GAGATTTTGC ACAAAGGTGA AGGCGACTAC
CTGCAAGAAT TGCAATTATT GGATCGTTAC AGCACCATAT TGCGTGAAAA GCGATTCCGT
GATGGTGGGC TTGATTTTGA AACCGAAGAG GTGCGCTTTA AGCTCGGTAA AGAGGGCGAA
CCGCTTGAAG TGATTAAAAA AGAGCGACTT GGCAGCCATC GTTTAATTGA AGAATTTATG
CTCCTTGCCA ATCGTAAAGT GGCAAAGCAT CTCACCAAAA CTTTCCGCGA AAACCGCAAA
ACACCACTTC CTGTGCTTTA CCGTGTGCAT GGTTCACCGC AAGAAGAAAA GGTGGTGATG
GTTGCAAATT TTGTAAAACG CCTCGGCTAC GATCTTAAAA TCAACCGTTC CAAAGAAGGT
ATTATCGTTT CAGCCCAATC TCTTCGTCAA CTTTTGCAGC AAGTAAAAGG CACCAACGTT
GAGTTCCTTG TGAGCGAGTT AGTGCTGCGC TGCATGTCGA AAGCGGTTTA TACGGGTGAT
AACATTGGGC ACTATGGACT TGGATTTGAG CACTACACCC ACTTTACCTC ACCCATTCGC
CGCTACCCCG ATTTGCTCAT TCATCGGATG CTTTTTGAGT ACGAACGGAT GCGCAAAAAG
CGTCGTAAAA TGAGCGAAAC ACGCCTTGGC GAGTTGGAAA CGACCATGCA GCGTGTATGC
CAAATTTCCA ACGAGCGTGA AAAAAGTGCT GCCGAAGCTG AACGTGAATC CATTAAGCTC
AAGCAAGTGG AGTACATGGC AAACCACGTT GGTAAAAGCT ATGCAGGCAT TATTTCGGGT
GCTACCGACT ACGGCATTTA CGTTCGCATG GTTGACTTTG CCATTGAAGG GATGGTACAC
ATGCGCAACC TCACCGATGA TTACTACGAG TACGATGAAA AAACCTACTC TTTAATTGGC
AAACGCCGCA AACGTCGCCT CCAAATAGGG CAACGTGTTA CGGTAAAAAT CAACAACGTG
GATATTCATC GTCGCACTAT TGATTTGGTG ATGGAGTTGG AATAG
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| Protein sequence | MAKKRSRRKS KDSAYKGKKP STRVPQGDRV SPNDHLLINE FLFKRGETSL AAEIVTFFAD
HEGERFRSVE LARLLGYTES RQLPGFWYVL HKLHEDGTLD KDSNRSYGMV GIDDASYQDH
LVHVKPFPLL GKKQYKAGEL YSGRLITHPN GYGFLEVEGF DDDIFIKAGD LGAALHGDEV
EVLVSSTPET YTAKASPHQR CEGVVQRVIN RHLTMIVGTL TKVARKFQLK PDDRKILPEI
FVALKHARKA KDGQKVLVGE LDFTQLGEIN GKVVEILGTA GDSAVEVSAI ARSKGIDETF
DDALLQQVQS VSDTISEADI KDRLDIRDKV VFTIDPIDAK DFDDALSVEM LEDGLCRVGV
HIADVSHYVQ ENSPLDREAQ KRATSVYLVD RVIPMLPARL SEQICSLNPG VDRMAYSIFF
TLTPEAEVRN YEFHKTVIHS KRRFTYEDVE EILHKGEGDY LQELQLLDRY STILREKRFR
DGGLDFETEE VRFKLGKEGE PLEVIKKERL GSHRLIEEFM LLANRKVAKH LTKTFRENRK
TPLPVLYRVH GSPQEEKVVM VANFVKRLGY DLKINRSKEG IIVSAQSLRQ LLQQVKGTNV
EFLVSELVLR CMSKAVYTGD NIGHYGLGFE HYTHFTSPIR RYPDLLIHRM LFEYERMRKK
RRKMSETRLG ELETTMQRVC QISNEREKSA AEAERESIKL KQVEYMANHV GKSYAGIISG
ATDYGIYVRM VDFAIEGMVH MRNLTDDYYE YDEKTYSLIG KRRKRRLQIG QRVTVKINNV
DIHRRTIDLV MELE
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