| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0722 |
|---|
| Symbol | |
|---|
| ID | 3747418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 996712 |
|---|
| End bp | 998142 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637773256 |
|---|
| Product | HDIG |
|---|
| Protein accession | YP_379036 |
|---|
| Protein GI | 78188698 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.314731 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAC TTCCCGCCAT TACACCTTTT GCAATTCCTG ATATTCTCTG CCGTATTGGC
GATATAGCCG ATCGTGAAGA TGCCGCCTGC TACCTTGTGG GCGGCTACGT GCGCGACCTC
ATGATGAAAC GCCCTTGCAC CGATGTTGAT ATTATGATTA CGGGCGATCC CGTACCGTTT
GCCCACATGG TGCAAGAAGA GCTACAAGGG CGTAACTTTG TACTCTTTGA ACGCTTTCGT
ACCGCACAAT TGGAGCTTGA TGATCCCAAC TTAGGAACGT TTAAAGTAGA ATTAGTGGGC
GCTCGAAAAG AGTCGTACAA TAGCGATTCC CGCAAACCCA TCACCCTTGT TGGCACGCTT
GAGGACGATT TAATGCGGCG CGATTTTACC ATTAACGCCC TCGCTATGCG CCTCAATCGC
GAAGAACGCT ATACGGTAAC AGACCTCTTT AACGGCATGG AGGATATGGA GGCAAAAATC
CTCCGCACAC CGTTAGAGCC ATTACAAACC TTCTCAGACG ATCCGTTGCG CATGATGCGT
GCGGCTCGCT TTGCCGCCCA GCTTGATTTT ACCCTTCTGC CCAATGCGCT TGAGGCAATT
CGAGCCATGC ACGAGCGCAT TCATATTGTC TCAATGGAAC GGGTAAGCCA CGAATTTCTT
AAAATTATGC GCACCCATCG CCCCTCTGTT GGCTTGCTTA TTTTGCATGA AACAGGATTA
TTGAAAGAAC TGCTGCCCGA AGTATCGGCT ATGGCTGGTA TTGAGCAAGT TGATGGCATG
GGGCATAAGG ATACGCTATT CCACACCATG CAAGTGGTTG ATACCGTAGC AACCTATTCC
GATAACCTTT GGCTACGCAT TGCCGCCCTG CTGCACGATG TTGCCAAACC CGTTACCAAA
CGCTTTTCCA AACAGAGCGG CTGGACATTC CACGGGCACG ATGCCGTAGG CATTAAAATG
GTAGCAAAAA TTTTTCGCAC CATGCGCTGG TCGCACGAGC ATCTTGAGTA TGTGCAAAAA
TTAGTACGCC TGCACCATCG CCCCATTCCC CTTTCCAAAG AGGAAATTAC CGACTCAGCC
GTGCGCCGCC TTATGTTTGA TGCAGGTGAA GATTTACGCG ACTTAATGAC GCTCTGCCGC
TCCGATGTTA CCAGCAAAAA TCCCCGCAAA GTGGCACGCA TTATGAGCAA CTTCAACCAC
GTTGAAGCTA AAATTGCCGA AGTGGGCGAA AAAGATCAGC TTGCAAAATG GCGCCCACCC
ATTAGCGGAC AAGATATTAT GGAGGCACTT GGTTTAGCAG AAGGCAAAGC GGTGGGAAAG
ATTAAAAAGC AGATGGAAAA TGCGGTGATT GATGGCATTA TTGCTTATGA TCGTGAAGCT
GCGTTAGCGT ATGTAAGGAA AGTGTATGAG GAGATGAAGG GAGAGACTTG A
|
|---|
| Protein sequence | MKALPAITPF AIPDILCRIG DIADREDAAC YLVGGYVRDL MMKRPCTDVD IMITGDPVPF
AHMVQEELQG RNFVLFERFR TAQLELDDPN LGTFKVELVG ARKESYNSDS RKPITLVGTL
EDDLMRRDFT INALAMRLNR EERYTVTDLF NGMEDMEAKI LRTPLEPLQT FSDDPLRMMR
AARFAAQLDF TLLPNALEAI RAMHERIHIV SMERVSHEFL KIMRTHRPSV GLLILHETGL
LKELLPEVSA MAGIEQVDGM GHKDTLFHTM QVVDTVATYS DNLWLRIAAL LHDVAKPVTK
RFSKQSGWTF HGHDAVGIKM VAKIFRTMRW SHEHLEYVQK LVRLHHRPIP LSKEEITDSA
VRRLMFDAGE DLRDLMTLCR SDVTSKNPRK VARIMSNFNH VEAKIAEVGE KDQLAKWRPP
ISGQDIMEAL GLAEGKAVGK IKKQMENAVI DGIIAYDREA ALAYVRKVYE EMKGET
|
|---|
| |