| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0703 |
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| Symbol | |
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| ID | 3747477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 975458 |
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| End bp | 979999 |
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| Gene Length | 4542 bp |
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| Protein Length | 1513 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637773237 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_379017 |
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| Protein GI | 78188679 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR01443] intein C-terminal splicing region
[TIGR01445] intein N-terminal splicing region
[TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAG AGCGCCTTTT TACCCAAGCA GGCAACAATG TATTTGATGC TTTTGAGTAT
TCACTTCGCA GTTCCGTCCT CCGCAATACC GATGGTTCGG TGGTTTTTGA AATGAATGAT
ATTGAGGTGC CTGTGCAGTG GTCGCAGGTG GCTACCGATA TTTTAGCGCA AAAGTATTTC
CGCAAAACGG GGGTGCAGCA GCGTGATGCT GAGGGTAACG TGCTGCTTGA TAGTGAGGGC
AATCCCTTGC TTGGTAGTGA GCGTTCGCTC AAGCAGGTGG TGCATCGCTT AGCGGGGTGC
TGGCGTGAGT GGGGTGAAAA GCATGGTTAT TTTGATACGC CTGATGATGC GCAAGCCTTT
TACGATGAGG TTGCGTTTAT GATTCTTGCA CAAATGGGGG CGCCAAATTC GCCGCAGTGG
TTTAATACGG GTTTGAATTT TGCGTATGGC ACTACGGGTC CAGCGCAAGG GCATTTTTAT
GTTGATCCTG CAACGGGTGA GGTAACAGAG TCGGGCGATG CCTACTCGCG TCCTCAAGCG
CATGCCTGCT TTATTCAATC GGTAAATGAC GATTTGGTAA ACGATGGTGG CATTTTTGAT
CTTGCTATTC GAGAAGCGCG TGTTTTTAAG TTTGGTAGTG GCTCGGGGAC GAACTATTCA
AGCTTGCGTT CAAGTGGCGA AAAGCTGAGT GGTGGCGGCA GTTCATCGGG GTTAATGAGC
TTTTTAAAGA TTTTTGATTC AGCCGCAGGA GCTATTAAGT CGGGCGGCAC GACGCGCCGT
GCTGCTAAAA TGGTGATTGT GGATATTGAC CATCCCGATG TTGAAAAGTT TATTGAGTGG
AAGGCGAAGG AGGAGGATAA GGTTGCCTCG TTGGTGGCAG GTTCGCGCAT TTGTTCACGC
TTTTTGCAAG CCATTGTAGA AGAGGCACTT GCGAATGGGG CTGACCGCAA AACGAATCCT
CGGTTGCAAC AGCTTATTCA AAATGCGCTG AGCCGTGGTG TGCCTATGAG CTATGTGATT
CGTGTGTTGG CGTTGGTTGA GCAAGGTTAC ACGTCGCTGG ATTTTAATGA GTACGATACG
CACTACGAAT CGGAAGCATA TCAAACCGTT GGAGGGCAAA ATTCCAACAA CACGGTGCGC
GTTACCAATG CGTTTATGCT TGCTGTGGCG AATGACGAGG TGTGGGAACT GCGCCAGCGC
ACAACGGGCA AGGTGAGTCG TGTGGTAAAG GCGCGTGAGT TATGGGAGAA AATTCTACTC
AGTGCATGGA AGTGTGCCGA TCCTGGGTTG CAGTTCGATA CCACCATTAA CGAGTGGCAC
ACCTGCCCAC AAAGCGGACG CATTAACGCA AGTAACCCGT GTGTTACTGC CGACACCCTT
ATTGCCACCG ATCGAGGGCT TGAACGCATT GGCAATATCG TTGGAGAATC GCGAGGCATT
AAAAGCATTG ATGGAAAATT ACATTGGGTT GAAAATATTT TCCCTACGGG CACGAAACCT
GTTTATCAAC TTCGCACCAA AAGCGGCTAT CAATTAAAAC TTACGGGCGA CCATGTCGTC
TTTACCGAAA ATCGTGGCGA TGTAAAAGCG TGCGAATTAC GCAAAGATGA TATGGTTCGT
CTTGTTGGCG CACCATTTGG TAAAGAAACA ACGGGTTCAA CCGATATAGC ACAACTCATT
GGGCTACTCA CGGGCGACGG CTGCATTACC ACTGCAAACG AAATTGCCGC ATCAGGAGAG
CAACGTCGTA CCGCCTTTCT CACTGTTAGT AAAGCGGAAC AAGAGATTGC GGAGTGGGCA
AACCAATTTA TCAATACGCT GCGTCCTGAA TTAGGCGAAC ACAACAAATC GGGTTCAGTA
ACCGAAACAG CTACAACGGC ACGCGTTGCG GTTGGTAGCC CAAGAATCCT CAAACAATTC
GAGGCGTTTG CAGTATTGGA TAAAGGCAGT GTGCATAAGT TGTTCACCGA TAAGGTGTTC
CAGCTTGCTC AATCAGAACA AGCTGCACTG TTACGTGGTC TGTTTACTGC CGATGGAACG
GTTGCTAATT ATTCCGATAA ATCACAATAC ATCGCACTTG ATGCAACTTC ACTCGAACTG
CTTCAGCAGG TGCAACTGCT TCTTTTTAAT TTTGGGATTA AATCGAAAAT CTATGAAAAT
AGAAGAGTCG GTGAACTTGT ATCGTTGCTT CCCGATGGTA AAGGTGGAAT AAAAGAATAC
CCTGTTCAAC AAATGCACAG CTTACGTATT AGCCGTAGCT CACGCATTCT TTTTGAGCAG
CAGATTGGTT TTATGGCGGA AAGCAAAAAA TATGAGGCAT TAGCTGAGTT AAATCGCACC
GTTTCAACCT ATCGTGATAG TGCTTACGAT GCGGTTGCAT CGCTTACCTA TAGTGGCGAG
GAAGCGGTTT TTGATCTCAC CGAACCAGAA ACTGATCACT TTATTGCCAA TGGTATTGGG
GTGCACAACT GTAGCGAGTA CATGTTTTTG GACGACACCG CATGTAACCT TGCCAGCTTA
AACCTCATCC ACTTTGTTGA TGAAGCAAGC GGCACCATTA AAATTAATGA GTTGCGCCAT
GCCGCCAGTC TTTGGACGGT AGTGCTTGAA ATTTCGGTGC TGATGGCGCA CTTCCCATCG
CAAACAATTG CACGCCTTAG CTACGACTTC CGCACGCTTG GGCTTGGCTT TGCGAATCTT
GGCACGGTGC TGATGGTACT TGGCATTCCT TACGATTCAG CCGAAGCGCT TGCAATGGCA
GGCGCAATTG CGTCGTTGAT GACAGGTCAA GCTTACGTTA CCTCCGCCGA AATGGCGCGC
GACCTTGGCA CCTTTAAGCG CTACAGCGAC AATGCGAACG ATATGCTTCG TGTGATGCGT
AACCATCGTC GGGCGGCACA AAATGCCGCA ACTACTGATT ACGAAGGGCT GTCGGTAATT
CCTCATGGTA TTAATGCTGC CCACTGCCAA ACGGCGTTAG CCGAAGCGGC GGGCGCTGTA
TGGAATGAGG TGTTGCAAAA AGGCGAAGCG CATGGCTTTC GCAACGCTCA AGTAAGCGTT
ATTGCACCTA CGGGCACCAT TGGTTTGGTG ATGGATTGCG ACACCACAGG CATTGAGCCT
GAATTTGCCA TTGTGAAGTT TAAAAAACTT GCAGGTGGCG GCTATTTCAA AATTGTGAAT
CAATCGGTAC ACAAAGCGTT GCTGCGACTT GGCTACAGTG CTGAGCAAAT TGAGGATATT
GAACGCTACT GCAAAGGGCA CGGCACGCTG GAAGGATGCC CAGCAATTAA TGGTGAATGG
CTGAAATGCA AAGGCTTTAC TGAGGAGAAA ATTGCCGCTG TTGAATCACA ACTTGCCACC
GTCTTCGATA TTCGCTTTGC TTTTAACAAA TGGATTCTTG GCGAAGAGTT TTGCGCCAGC
TTAGGCTTTT CAGAGGAGCA GCTCGACAAC CCCGACTTCG ACATGCTTTT AGAGCTTGGA
GCCACCACCG CCGAAGCCGC TGCGGCTAAC GACTACATTT GCGGCACCAT GATGATTGAA
GGCGCTCCCC ATCTTCAGCC CGAACATCTT GCCGTTTTTG ATTGCGCCAG CAAATGCGGC
AAAAAAGGCA AACGCTACAT TCGCCATCAA GCACACATTA ACATGATGGC TGCCGTGCAA
CCCTTTATTT CAGGTGCTAT TTCTAAAACG GTGAACATGC CGGCTACTGC CACCACTGCC
GAAATTGGCA ACGTTTATCG CGACGCATGG CAGCAAATGG TAAAAGCTGT AACCATTTAT
CGCGATGGCT CAAAGCTTTC TCAACCGCTG AACAGTTCAA GCTACAACGA CCTTGACGAA
GTTATTATGC TTGGCACCGA AGAGACGCTT GATGAAACCA AAGGTCCACA AGAGGTGCAA
GAGCGCATTA TTGAGCGCGT CTATTACCGC TCCGAACGCC GCATGTTGCC AAAGCGCCGC
AAAGGGTACA TTCGCGAAGC TTACGTTGGC GGGCACAAAG TCTTTCTCCG CACCGGTGAG
TATGATGATG GTACGCTGGG TGAAATTTTT ATTGATATGT ATAAGGAGGG AGCCTCCTTT
AAAGGGTTGC TCAACTGTTT TGCCGTGCTT GCTTCCAAAG CGCTCCAATA CGGTATGCCG
CTTGAGGAGT TGGTTGATAG CTTCACCTTT ACCCGCTTTG ATCCGGCAGG AACGGTGCAG
GGGCATAACG TCATTAAAAA CTCCACATCA ATTCTCGACT ACGTCTTCCG CTCCATAGGC
TACGATTACC TTGGACGCAA AGATTTTGTA CATGTAAAAG CCGTTGATGA AGTGCCTGAA
GGGACGTTGG TGCCAGCCGA GCAGAAAAAA GCAAGCCACC ACTCTGCCGC AAACCATAGC
ACGGATGGCG CAGGTGTAGT GAGCAATAAA AGCCAAATTT ATCAAGCGAA AGTGCAAGGC
TACACGGGTG AGCAATGCGA AAATTGCGGC TCCATGCACG TTAAGCAAAA CGGGACGTGC
AAAGTGTGCG AAGATTGCGG TATGACAACG GGATGTTCTT AA
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| Protein sequence | MKIERLFTQA GNNVFDAFEY SLRSSVLRNT DGSVVFEMND IEVPVQWSQV ATDILAQKYF
RKTGVQQRDA EGNVLLDSEG NPLLGSERSL KQVVHRLAGC WREWGEKHGY FDTPDDAQAF
YDEVAFMILA QMGAPNSPQW FNTGLNFAYG TTGPAQGHFY VDPATGEVTE SGDAYSRPQA
HACFIQSVND DLVNDGGIFD LAIREARVFK FGSGSGTNYS SLRSSGEKLS GGGSSSGLMS
FLKIFDSAAG AIKSGGTTRR AAKMVIVDID HPDVEKFIEW KAKEEDKVAS LVAGSRICSR
FLQAIVEEAL ANGADRKTNP RLQQLIQNAL SRGVPMSYVI RVLALVEQGY TSLDFNEYDT
HYESEAYQTV GGQNSNNTVR VTNAFMLAVA NDEVWELRQR TTGKVSRVVK ARELWEKILL
SAWKCADPGL QFDTTINEWH TCPQSGRINA SNPCVTADTL IATDRGLERI GNIVGESRGI
KSIDGKLHWV ENIFPTGTKP VYQLRTKSGY QLKLTGDHVV FTENRGDVKA CELRKDDMVR
LVGAPFGKET TGSTDIAQLI GLLTGDGCIT TANEIAASGE QRRTAFLTVS KAEQEIAEWA
NQFINTLRPE LGEHNKSGSV TETATTARVA VGSPRILKQF EAFAVLDKGS VHKLFTDKVF
QLAQSEQAAL LRGLFTADGT VANYSDKSQY IALDATSLEL LQQVQLLLFN FGIKSKIYEN
RRVGELVSLL PDGKGGIKEY PVQQMHSLRI SRSSRILFEQ QIGFMAESKK YEALAELNRT
VSTYRDSAYD AVASLTYSGE EAVFDLTEPE TDHFIANGIG VHNCSEYMFL DDTACNLASL
NLIHFVDEAS GTIKINELRH AASLWTVVLE ISVLMAHFPS QTIARLSYDF RTLGLGFANL
GTVLMVLGIP YDSAEALAMA GAIASLMTGQ AYVTSAEMAR DLGTFKRYSD NANDMLRVMR
NHRRAAQNAA TTDYEGLSVI PHGINAAHCQ TALAEAAGAV WNEVLQKGEA HGFRNAQVSV
IAPTGTIGLV MDCDTTGIEP EFAIVKFKKL AGGGYFKIVN QSVHKALLRL GYSAEQIEDI
ERYCKGHGTL EGCPAINGEW LKCKGFTEEK IAAVESQLAT VFDIRFAFNK WILGEEFCAS
LGFSEEQLDN PDFDMLLELG ATTAEAAAAN DYICGTMMIE GAPHLQPEHL AVFDCASKCG
KKGKRYIRHQ AHINMMAAVQ PFISGAISKT VNMPATATTA EIGNVYRDAW QQMVKAVTIY
RDGSKLSQPL NSSSYNDLDE VIMLGTEETL DETKGPQEVQ ERIIERVYYR SERRMLPKRR
KGYIREAYVG GHKVFLRTGE YDDGTLGEIF IDMYKEGASF KGLLNCFAVL ASKALQYGMP
LEELVDSFTF TRFDPAGTVQ GHNVIKNSTS ILDYVFRSIG YDYLGRKDFV HVKAVDEVPE
GTLVPAEQKK ASHHSAANHS TDGAGVVSNK SQIYQAKVQG YTGEQCENCG SMHVKQNGTC
KVCEDCGMTT GCS
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