| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0689 |
|---|
| Symbol | |
|---|
| ID | 3746769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 959742 |
|---|
| End bp | 961088 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637773223 |
|---|
| Product | PucC protein |
|---|
| Protein accession | YP_379003 |
|---|
| Protein GI | 78188665 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.85813 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAT TCAACCTTGT ACGCCTCTCT CTCTTTCAAA TGGGCTTTGG CATTATGCTG
GGCTTTTTGC TTGATACGCT CAATCGAGTA ATGACTACGG AGCTGCGCAT TTCAGCGACC
ATTGTTTTTG GGCTTATCAG TTTAAAAGAG CTGTTAGCCA TTTTTGGCGT TAAAGTGTGG
GCTGGCAATT TATCGGATCG TTCCCAAATT TTTGGGCTTC GTCGCACGCC ATACATTTTG
TTGGGCTTAG TGTCCTGCGT CTTTTCCTTT ATTATGGCGC CAACTGCTGC CTACGAGGTA
ACGGTGGGCG GAGTTGGTTT TGCCGAAATG ATTCCTGCTA TGCTGCAAGA TGTTGGACTG
CTAAAGTTAG CGCTCATTTT TCTGCTCTTT GGCTTTGGTT TGCAAGTTGC CACTACGGCT
TACTACGCAC TGCTTGCTGA TACGGTTGAC GAGGCAAACC TTGGCAAAAT TACCGGTGCA
AGCTGGACGC TTATGGTGCT CACCACCATT GTTTCCACCC GTATTGTTGG CTCATATTTA
GACCACTTTA CCCCCGAACG CTTACTCTTT GTTGCTGAAG TTGGCGGTTT TATTGCCCTC
GCACTTGGGC TTATTGCCGT ACTTGGGGTT GAGCAACGCA ACGGCGAAAT AAAAGAGGGT
AAAGAAAAAC ATGCCCTCTC TTTTGCGCAA TCGTTACAAT TGCTCACCTC TTCCCCCAAA
ACCCTCTTTT TTGCCTCCTA CATCTTCATT TCCATTTTTG CCCTTTTTGC AAATGAAATT
GTGATGGATC CATTTGGCGC CCATGTGTTT GATATGTCGG TTGGAACTAC TACAAAGCTT
TTTCGCCCCA CCATGGGTGG TATGCAACTG CTCTTTATGT TGATTGTCGG CTTTTTGCTG
GGAAGAATTG GGCAAAAACG AGGAGCGCTT ATTGGCAACA TTATGTGCAT GATTGGCTTT
GGACTGCTGA TTGGTGCCGC CTTTTCGCGC GACGAGCAAT TTTTACGCAT TGCCCTTGTG
GTAACGGGTA TTGGGCTTGG CGCATCCAGC GTTTCCAATA TTTCTATGAT GATGGCAATG
ACGGCAGGGC GCAGCGGCGT TTACATTGGT CTTTGGGGCA CCGCACAAAG CCTTGCAATT
TTTATTGGGC ACCTCGGCGC AGGTATGATT ATTGACGTGG TCTATCACTT TACAGGTCAA
TATGTGTGGG CATACGCCGC CATTTTTGCT ATGGAAATTG TTGCTTTTGC CATTGCCACC
CTTATGATTT CGCACGTTTC CAAAGAGGAG TTTGAAGCCG AAAGCAAAGC AAAACTTGCC
GAATTAGCAC TTAGCGCCAA AGGATAA
|
|---|
| Protein sequence | MKKFNLVRLS LFQMGFGIML GFLLDTLNRV MTTELRISAT IVFGLISLKE LLAIFGVKVW
AGNLSDRSQI FGLRRTPYIL LGLVSCVFSF IMAPTAAYEV TVGGVGFAEM IPAMLQDVGL
LKLALIFLLF GFGLQVATTA YYALLADTVD EANLGKITGA SWTLMVLTTI VSTRIVGSYL
DHFTPERLLF VAEVGGFIAL ALGLIAVLGV EQRNGEIKEG KEKHALSFAQ SLQLLTSSPK
TLFFASYIFI SIFALFANEI VMDPFGAHVF DMSVGTTTKL FRPTMGGMQL LFMLIVGFLL
GRIGQKRGAL IGNIMCMIGF GLLIGAAFSR DEQFLRIALV VTGIGLGASS VSNISMMMAM
TAGRSGVYIG LWGTAQSLAI FIGHLGAGMI IDVVYHFTGQ YVWAYAAIFA MEIVAFAIAT
LMISHVSKEE FEAESKAKLA ELALSAKG
|
|---|
| |