| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0623 |
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| Symbol | |
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| ID | 3746938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 897461 |
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| End bp | 898561 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637773159 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_378939 |
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| Protein GI | 78188601 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00992131 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCAC TTGAGCATAC GTTTTATATG CAGCGTGCTT TGGAGTTAGC GTTGCGTGGT
GCTGGAAGGG TAAGCCCCAA TCCAATGGTG GGCGCTCTCT TAGTTCAAGA GGGGGAAATT
ATTGGCGAAG GGTGGCATGA GCGTTATGGC GAAGCTCATG CAGAGGTGAA TGCGATTGCT
GCCGTTACCA ATGAGGCATG GTTGCGTGAA GCGACGTTGT ACGTAACCTT AGAGCCATGT
TCGCATTTTG GCAAAACACC TCCTTGCAGC GATTTAATTA TTGCAAAGCA AATTCCGCGC
GTTGTGGTTG GCTGTCGCGA TCCATTTCCT GCTGTAGCAG GACGAGGTAT TGCAAAATTG
CGTGCTGCGG GCATTGAGGT TATTGAAGGC GTTTTAGAAG CAGAATGTTT ACAAAGCAAC
GAAGCGTTTA TCAAAAGCCA CACCGTTGGA TTGCCATTTG TAACGCTGAA GTTAGCGCAA
ACTCTTGATG GCAAGTTAGC CACGGTAACG GGTGCATCGC GTTGGATTAC CGGAGAAGAG
GCTCGTGCTG AGGTGCACCG TTTGCGAAGT GTGTATGATG CGGTGCTGGT GGGTGGCGCT
ACAGCACTTG CCGATAATTC ACAACTTACG GTTCGCCAAG CCAACGGGCG CAATCCATTG
CGCGTTGTGC TTGATCGTTC ACTTCAGTTG CCGCTTGAAA GCCTTATCTT TAACCATGAA
GCGCCAACCT TGCTTTTTAC TTCTCTCTCT CAGCAGCACT CTCCAAAAGT GGAGGCGTTA
CAAAAATTGG GCGTAAGCGT TCATGCTGTT AGCGAAAGTG CCGAGGGGTT GCAACTGCGT
GAAGTGCTGG AAGAGCTGCA TCATCGGCAC ATCCTTTCCG TATTAGTAGA GAGTGGCAGT
CGCCTTGGTG CTGCACTGTT GCAAGCAGGT TTTGTTGATA AACTCTTGAT TTTTATAGCG
CCAAAGCTCT TTGGTGGCGA TGGATTAAGT GCCTTTGCTC CGCTTGGCGT AACGGTGCCC
GACGAAGCAA TTGCACTACG CTTTGAGTTG CCACGCTTTT TTGGAAAAGA TTTGTTGCTT
GAGGCTTACA TTAACTCTTA G
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| Protein sequence | MPALEHTFYM QRALELALRG AGRVSPNPMV GALLVQEGEI IGEGWHERYG EAHAEVNAIA
AVTNEAWLRE ATLYVTLEPC SHFGKTPPCS DLIIAKQIPR VVVGCRDPFP AVAGRGIAKL
RAAGIEVIEG VLEAECLQSN EAFIKSHTVG LPFVTLKLAQ TLDGKLATVT GASRWITGEE
ARAEVHRLRS VYDAVLVGGA TALADNSQLT VRQANGRNPL RVVLDRSLQL PLESLIFNHE
APTLLFTSLS QQHSPKVEAL QKLGVSVHAV SESAEGLQLR EVLEELHHRH ILSVLVESGS
RLGAALLQAG FVDKLLIFIA PKLFGGDGLS AFAPLGVTVP DEAIALRFEL PRFFGKDLLL
EAYINS
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